RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 TAL1P17542 331 aaPredicted RBP18.93■□□□□ 0.62
CIT-212ENST00000543239 HSPA4P34932 840 aa18.93■□□□□ 0.62
CIT-212ENST00000543239 MNX1P50219 401 aaPredicted RBP18.93■□□□□ 0.62
CIT-212ENST00000543239 CNTN2Q02246 1040 aa18.93■□□□□ 0.62
CIT-212ENST00000543239 QRICH1Q2TAL8 776 aa18.93■□□□□ 0.62
CIT-212ENST00000543239 PRAMEF19Q5SWL8 479 aa18.93■□□□□ 0.62
CIT-212ENST00000543239 NECAB2Q7Z6G3 386 aa18.93■□□□□ 0.62
CIT-212ENST00000543239 RASEFQ8IZ41 740 aa18.93■□□□□ 0.62
CIT-212ENST00000543239 ZNF654Q8IZM8 581 aa18.93■□□□□ 0.62
CIT-212ENST00000543239 CLEC4DQ8WXI8 215 aa18.93■□□□□ 0.62
CIT-212ENST00000543239 KCNB2Q92953 911 aa18.93■□□□□ 0.62
CIT-212ENST00000543239 PAWRQ96IZ0 340 aaKnown RBP18.93■□□□□ 0.62
CIT-212ENST00000543239 ABCB11O95342 1321 aa18.93■□□□□ 0.62
CIT-212ENST00000543239 CCDC69A6NI79 296 aa18.92■□□□□ 0.62
CIT-212ENST00000543239 ASB14A6NK59 587 aa18.92■□□□□ 0.62
CIT-212ENST00000543239 SNAI1O95863 264 aaPredicted RBP18.92■□□□□ 0.62
CIT-212ENST00000543239 HMGB1P09429 215 aaKnown RBP18.92■□□□□ 0.62
CIT-212ENST00000543239 ZNF865P0CJ78 1059 aaPredicted RBP18.92■□□□□ 0.62
CIT-212ENST00000543239 COL9A3Q14050 684 aaPredicted RBP18.92■□□□□ 0.62
CIT-212ENST00000543239 USH1GQ495M9 461 aa18.92■□□□□ 0.62
CIT-212ENST00000543239 ARMCX2Q7L311 632 aa18.92■□□□□ 0.62
CIT-212ENST00000543239 RGS22Q8NE09 1264 aa18.92■□□□□ 0.62
CIT-212ENST00000543239 DIS3LQ8TF46 1054 aaKnown RBP18.92■□□□□ 0.62
CIT-212ENST00000543239 MTMR8Q96EF0 704 aa18.92■□□□□ 0.62
CIT-212ENST00000543239 ABHD16BQ9H3Z7 469 aa18.92■□□□□ 0.62
CIT-212ENST00000543239 GPHNQ9NQX3 736 aaPredicted RBP18.92■□□□□ 0.62
CIT-212ENST00000543239 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.92■□□□□ 0.62
CIT-212ENST00000543239 PDE4DIPQ5VU43 2346 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 LOC102724159A0A0B4J2E5 919 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 SOWAHBA6NEL2 793 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 CALM1P0DP23 149 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 CALM2P0DP24 149 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 CALM3P0DP25 149 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 AKR1A1P14550 325 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 KIF5BP33176 963 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 BAATQ14032 418 aaPredicted RBP18.91■□□□□ 0.62
CIT-212ENST00000543239 PWP2Q15269 919 aaKnown RBP18.91■□□□□ 0.62
CIT-212ENST00000543239 NFXL1Q6ZNB6 911 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 RNF207Q6ZRF8 634 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 DHX32Q7L7V1 743 aaKnown RBP18.91■□□□□ 0.62
CIT-212ENST00000543239 SGMS1Q86VZ5 419 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 FBXO11Q86XK2 927 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 CCDC144CPQ8IYA2 1237 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 CTCFLQ8NI51 663 aaPredicted RBP18.91■□□□□ 0.62
CIT-212ENST00000543239 RIOX1Q9H6W3 641 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 VAT1LQ9HCJ6 419 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 ADD3Q9UEY8 706 aaKnown RBP18.91■□□□□ 0.62
CIT-212ENST00000543239 SMCHD1A6NHR9 2005 aa18.91■□□□□ 0.62
CIT-212ENST00000543239 PTPDC1A2A3K4 754 aa18.9■□□□□ 0.62
CIT-212ENST00000543239 ZBTB5O15062 677 aa18.9■□□□□ 0.62
CIT-212ENST00000543239 EXOSC10Q01780 885 aaKnown RBP18.9■□□□□ 0.62
CIT-212ENST00000543239 TRAF1Q13077 416 aa18.9■□□□□ 0.62
CIT-212ENST00000543239 ADCK5Q3MIX3 580 aa18.9■□□□□ 0.62
CIT-212ENST00000543239 ARRDC4Q8NCT1 418 aa18.9■□□□□ 0.62
CIT-212ENST00000543239 NUP133Q8WUM0 1156 aa18.9■□□□□ 0.62
CIT-212ENST00000543239 AMNQ9BXJ7 453 aa18.9■□□□□ 0.62
CIT-212ENST00000543239 C11orf49Q9H6J7 331 aa18.9■□□□□ 0.62
CIT-212ENST00000543239 ASTN1O14525 1302 aa18.9■□□□□ 0.62
CIT-212ENST00000543239 DNM1LO00429 736 aa18.89■□□□□ 0.61
CIT-212ENST00000543239 RARBP10826 455 aa18.89■□□□□ 0.61
CIT-212ENST00000543239 COL6A1P12109 1028 aa18.89■□□□□ 0.61
CIT-212ENST00000543239 RPS6P62753 249 aaKnown RBP18.89■□□□□ 0.61
CIT-212ENST00000543239 ACVR2BQ13705 512 aa18.89■□□□□ 0.61
CIT-212ENST00000543239 PRPF38BQ5VTL8 546 aaKnown RBP18.89■□□□□ 0.61
CIT-212ENST00000543239 SLC30A10Q6XR72 485 aa18.89■□□□□ 0.61
CIT-212ENST00000543239 MCF2L2Q86YR7 1114 aa18.89■□□□□ 0.61
CIT-212ENST00000543239 MORC4Q8TE76 937 aa18.89■□□□□ 0.61
CIT-212ENST00000543239 ZHX1Q9UKY1 873 aaPredicted RBP18.89■□□□□ 0.61
CIT-212ENST00000543239 FAM184BQ9ULE4 1060 aa18.89■□□□□ 0.61
CIT-212ENST00000543239 MRPL11Q9Y3B7 192 aaKnown RBP18.89■□□□□ 0.61
CIT-212ENST00000543239 SLC12A7Q9Y666 1083 aa18.89■□□□□ 0.61
CIT-212ENST00000543239 LCTP09848 1927 aa18.89■□□□□ 0.61
CIT-212ENST00000543239 CYTH3O43739 400 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 SMARCA1P28370 1054 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 GNAQP50148 359 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 SLC35G1Q2M3R5 365 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 ANO1Q5XXA6 986 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 DNERQ8NFT8 737 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 LZTS2Q9BRK4 669 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 MYL10Q9BUA6 226 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 SPZ1Q9BXG8 430 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 LRRC2Q9BYS8 371 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 KATNBL1Q9H079 304 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 SNX14Q9Y5W7 946 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 MYH6P13533 1939 aa18.88■□□□□ 0.61
CIT-212ENST00000543239 LRRC37A2A6NM11 1700 aa18.87■□□□□ 0.61
CIT-212ENST00000543239 CALML3P27482 149 aa18.87■□□□□ 0.61
CIT-212ENST00000543239 ALDH5A1P51649 535 aaPredicted RBP18.87■□□□□ 0.61
CIT-212ENST00000543239 DPF3Q92784 378 aa18.87■□□□□ 0.61
CIT-212ENST00000543239 PIGSQ96S52 555 aa18.87■□□□□ 0.61
CIT-212ENST00000543239 MPHOSPH6Q99547 160 aaKnown RBP18.87■□□□□ 0.61
CIT-212ENST00000543239 XPNPEP3Q9NQH7 507 aa18.87■□□□□ 0.61
CIT-212ENST00000543239 MCM3APO60318 1980 aa18.86■□□□□ 0.61
CIT-212ENST00000543239 PNMA6FA0A0J9YX94 578 aa18.86■□□□□ 0.61
CIT-212ENST00000543239 KBTBD13C9JR72 458 aa18.86■□□□□ 0.61
CIT-212ENST00000543239 PPP1R11O60927 126 aaPredicted RBP18.86■□□□□ 0.61
CIT-212ENST00000543239 GHRHRQ02643 423 aa18.86■□□□□ 0.61
CIT-212ENST00000543239 CCDC144BQ3MJ40 725 aa18.86■□□□□ 0.61
CIT-212ENST00000543239 APOA5Q6Q788 366 aa18.86■□□□□ 0.61
CIT-212ENST00000543239 SYNE3Q6ZMZ3 975 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms