RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 SPAG7O75391 227 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 RPSAP08865 295 aaKnown RBP21.06■□□□□ 0.96
HDAC4-215ENST00000543185 RCN2Q14257 317 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 CWF19L2Q2TBE0 894 aaKnown RBP21.06■□□□□ 0.96
HDAC4-215ENST00000543185 KRT39Q6A163 491 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 KLC3Q6P597 504 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 PALMDQ9NP74 551 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 POLE3Q9NRF9 147 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 MYH9P35579 1960 aaKnown RBP21.06■□□□□ 0.96
HDAC4-215ENST00000543185 MBD4O95243 580 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 TRIM33Q9UPN9 1127 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 GTPBP6O43824 516 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-215ENST00000543185 EIF3DO15371 548 aaKnown RBP eCLIP21.05■□□□□ 0.961e-6■■□□□ 13.9
HDAC4-215ENST00000543185 TTLL3Q9Y4R7 772 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 COPG1Q9Y678 874 aaKnown RBP21.05■□□□□ 0.96
HDAC4-215ENST00000543185 CATSPER1Q8NEC5 780 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 STK17AQ9UEE5 414 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 ART3Q13508 389 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 ABCC12Q96J65 1359 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 GPAA1O43292 621 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 TNNI1P19237 187 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 BFSP1Q12934 665 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 AZI2Q9H6S1 392 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 ZMYM6O95789 1325 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 MAP3K10Q02779 954 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 LONRF3Q496Y0 759 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 TTC19Q6DKK2 380 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-215ENST00000543185 TPTE2Q6XPS3 522 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 DESI2Q9BSY9 194 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 TMEM63CQ9P1W3 806 aa21.05■□□□□ 0.96
HDAC4-215ENST00000543185 SNX1Q13596 522 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 ZNF710Q8N1W2 664 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 ANAPC5Q9UJX4 755 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 POLE2P56282 527 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 KRT4P19013 534 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 DRP2Q13474 957 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 POLKQ9UBT6 870 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 KBTBD3Q8NAB2 608 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 TTC1Q99614 292 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 MED23Q9ULK4 1368 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 CHGBP05060 677 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 PFKFB1P16118 471 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 LONP1P36776 959 aaKnown RBP21.04■□□□□ 0.96
HDAC4-215ENST00000543185 GSDMAQ96QA5 445 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 SBNO2Q9Y2G9 1366 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 SERPINB2P05120 415 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 TDRD7Q8NHU6 1098 aaKnown RBP21.04■□□□□ 0.96
HDAC4-215ENST00000543185 MROH5Q6ZUA9 1318 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 MYSM1Q5VVJ2 828 aa21.04■□□□□ 0.96
HDAC4-215ENST00000543185 CACNA1FO60840 1977 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 MCF2LO15068 1137 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 CHMP2AO43633 222 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 GADD45BO75293 160 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-215ENST00000543185 RXRAP19793 462 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 TNNI3KQ59H18 835 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 KCTD16Q68DU8 428 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 FPGT-TNNI3KV9GXZ4 949 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 CD109Q6YHK3 1445 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 ESYT2A0FGR8 921 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 MIGA1Q8NAN2 632 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 PPP1R12AO14974 1030 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-215ENST00000543185 MSH2P43246 934 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 PICK1Q9NRD5 415 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 KRT40Q6A162 431 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 A6NJR5 290 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 ARHGDIAP52565 204 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 PPP2R5CQ13362 524 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 GIPC2Q8TF65 315 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 ZBTB9Q96C00 473 aa21.03■□□□□ 0.96
HDAC4-215ENST00000543185 PCDH11XQ9BZA7 1347 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 PCDH11YQ9BZA8 1340 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 F8W8V4 182 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 VAMP4O75379 141 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 B4E1Z4 1266 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 ABCB4P21439 1286 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 TXKP42681 527 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 BSPRYQ5W0U4 402 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 RNF207Q6ZRF8 634 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 AK8Q96MA6 479 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 CFAP73A6NFT4 308 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 HNRNPCL2B2RXH8 293 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 GSTA4O15217 222 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 HNRNPCL1O60812 293 aaKnown RBP21.02■□□□□ 0.96
HDAC4-215ENST00000543185 CD19P15391 556 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 SLC1A4P43007 532 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 POMGNT1Q8WZA1 660 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 ECEL1O95672 775 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 TRAPPC10P48553 1259 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 LRRC8BQ6P9F7 803 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 PRPF38AQ8NAV1 312 aaKnown RBP21.02■□□□□ 0.96
HDAC4-215ENST00000543185 PANX2Q96RD6 677 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 YTHDC2Q9H6S0 1430 aaKnown RBP21.02■□□□□ 0.96
HDAC4-215ENST00000543185 HARSP12081 509 aaKnown RBP21.02■□□□□ 0.96
HDAC4-215ENST00000543185 C8orf58Q8NAV2 365 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 NEK9Q8TD19 979 aa21.02■□□□□ 0.96
HDAC4-215ENST00000543185 DHTKD1Q96HY7 919 aaPredicted RBP21.02■□□□□ 0.96
HDAC4-215ENST00000543185 CABP7Q86V35 215 aa21.02■□□□□ 0.95
HDAC4-215ENST00000543185 PAIP2BQ9ULR5 123 aaKnown RBP21.02■□□□□ 0.95
HDAC4-215ENST00000543185 DIS3Q9Y2L1 958 aaKnown RBP21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms