RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 SSH3Q8TE77 659 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 EAF2Q96CJ1 260 aaPredicted RBP11.31□□□□□ -0.6
C2CD3-219ENST00000542930 MFSD14AQ96MC6 490 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 NUP88Q99567 741 aaPredicted RBP11.31□□□□□ -0.6
C2CD3-219ENST00000542930 FTOQ9C0B1 505 aaKnown RBP eCLIP11.31□□□□□ -0.6
C2CD3-219ENST00000542930 SUGCTQ9HAC7 445 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 RAVER2Q9HCJ3 691 aaKnown RBP11.31□□□□□ -0.6
C2CD3-219ENST00000542930 CTDP1Q9Y5B0 961 aaPredicted RBP11.31□□□□□ -0.6
C2CD3-219ENST00000542930 ZNF318Q5VUA4 2279 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 MYH8P13535 1937 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 COL4A4P53420 1690 aaPredicted RBP11.3□□□□□ -0.6
C2CD3-219ENST00000542930 LCHNA4D1U4 455 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 F5H6K3 240 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 PDE6AP16499 860 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 KCNJ6P48051 423 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 OAZ1P54368 228 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 KLRC3Q07444 240 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 C12orf60Q5U649 245 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 IQSEC1Q6DN90 963 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 HFE2Q6ZVN8 426 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 LCORLQ8N3X6 602 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 RETREG2Q8NC44 543 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 PHOX2BQ99453 314 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 ATP8A2Q9NTI2 1148 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 SCN5AQ14524 2016 aa11.3□□□□□ -0.6
C2CD3-219ENST00000542930 TCRBV5S4A2TA0A5A2 114 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 ANP32CO43423 234 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 PTGS1P23219 599 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 ERVK-21P61565 698 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 TAPT1Q6NXT6 567 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 TRMT2AQ8IZ69 625 aaKnown RBP11.29□□□□□ -0.6
C2CD3-219ENST00000542930 NEK9Q8TD19 979 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.29□□□□□ -0.6
C2CD3-219ENST00000542930 TGS1Q96RS0 853 aaKnown RBP11.29□□□□□ -0.6
C2CD3-219ENST00000542930 ZBED2Q9BTP6 218 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.29□□□□□ -0.6
C2CD3-219ENST00000542930 PDGFCQ9NRA1 345 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 POLR3EQ9NVU0 708 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 PRKAG3Q9UGI9 489 aa11.29□□□□□ -0.6
C2CD3-219ENST00000542930 NOP58Q9Y2X3 529 aaKnown RBP11.29□□□□□ -0.6
C2CD3-219ENST00000542930 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 USP17L12C9JPN9 530 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 USP17L21D6R901 530 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 NDUFB10O96000 172 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 RARSP54136 660 aaKnown RBP11.28□□□□□ -0.6
C2CD3-219ENST00000542930 ATP8B2P98198 1209 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 PURAQ00577 322 aaKnown RBP11.28□□□□□ -0.6
C2CD3-219ENST00000542930 BFSP2Q13515 415 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 KIFC2Q96AC6 838 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 RAD9AQ99638 391 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 UPF3BQ9BZI7 483 aaKnown RBP11.28□□□□□ -0.6
C2CD3-219ENST00000542930 ACAD9Q9H845 621 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 ARMT1Q9H993 441 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 A1CFQ9NQ94 594 aaKnown RBP11.28□□□□□ -0.6
C2CD3-219ENST00000542930 HOMER2Q9NSB8 354 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 NYAP2Q9P242 653 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 MTUS1Q9ULD2 1270 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 FAM50BQ9Y247 325 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 COG6Q9Y2V7 657 aa11.28□□□□□ -0.6
C2CD3-219ENST00000542930 ZDBF2Q9HCK1 2354 aa11.27□□□□□ -0.6
C2CD3-219ENST00000542930 CYP2D7A0A087X1C5 515 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 LINC01553A4QN01 128 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 PRKAB2O43741 272 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 BCAR3O75815 825 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 PTPN5P54829 565 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 WDR5P61964 334 aaKnown RBP11.27□□□□□ -0.61
C2CD3-219ENST00000542930 ZP2Q05996 745 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 LRRFIP1Q32MZ4 808 aaKnown RBP11.27□□□□□ -0.61
C2CD3-219ENST00000542930 TMEM63BQ5T3F8 832 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.61
C2CD3-219ENST00000542930 ANKS1AQ92625 1134 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.61
C2CD3-219ENST00000542930 VTA1Q9NP79 307 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 FEM1BQ9UK73 627 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 MYO15AQ9UKN7 3530 aa11.27□□□□□ -0.61
C2CD3-219ENST00000542930 TET1Q8NFU7 2136 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 H3BQ06 376 aaPredicted RBP11.26□□□□□ -0.61
C2CD3-219ENST00000542930 IPO8O15397 1037 aaKnown RBP11.26□□□□□ -0.61
C2CD3-219ENST00000542930 GJB5O95377 273 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 FDX1P10109 184 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 TRIM27P14373 513 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 CPT1AP50416 773 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 PTPN11Q06124 597 aaPredicted RBP11.26□□□□□ -0.61
C2CD3-219ENST00000542930 NBPF20Q3BBV1 942 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 DUSP28Q4G0W2 176 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 FAM47CQ5HY64 1035 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 NFRKBQ6P4R8 1299 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 KIAA1211Q6ZU35 1233 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 EEPD1Q7L9B9 569 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 TMCO2Q7Z6W1 182 aaPredicted RBP11.26□□□□□ -0.61
C2CD3-219ENST00000542930 ADHFE1Q8IWW8 467 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 PRSS33Q8NF86 280 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 PRRX2Q99811 253 aa11.26□□□□□ -0.61
C2CD3-219ENST00000542930 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
C2CD3-219ENST00000542930 CTNNA3Q9UI47 895 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms