RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 C16orf59Q7L2K0 433 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 DHX32Q7L7V1 743 aaKnown RBP13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 CLEC10AQ8IUN9 316 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 KLHDC9Q8NEP7 349 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 NCOA7Q8NI08 942 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 SDR42E1Q8WUS8 393 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 FAM122AQ96E09 287 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 MTA3Q9BTC8 594 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 RNF41Q9H4P4 317 aaPredicted RBP13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 CNNM2Q9H8M5 875 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 DCP1AQ9NPI6 582 aaPredicted RBP13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 SH2B1Q9NRF2 756 aaPredicted RBP13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 ARPP21Q9UBL0 812 aaPredicted RBP13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 MSRAQ9UJ68 235 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 ELP1O95163 1332 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 ZNFX1Q9P2E3 1918 aaKnown RBP13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 SYNGAP1Q96PV0 1343 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 GRXCR1A8MXD5 290 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 VWA5AO00534 786 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 CYP2D6P10635 497 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 AKR1B1P15121 316 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 CSF2RAP15509 400 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 AK2P54819 239 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 RAB30Q15771 203 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 CCDC85BQ15834 202 aaPredicted RBP13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 SBK1Q52WX2 424 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 CCSAPQ6IQ19 270 aaPredicted RBP13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 ZNF365Q70YC5 407 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 RALYLQ86SE5 291 aaKnown RBP13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 PCSK9Q8NBP7 692 aaKnown RBP13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 STAG1Q8WVM7 1258 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 VTI1AQ96AJ9 217 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 DYNLL2Q96FJ2 89 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 INTS4Q96HW7 963 aaKnown RBP13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 CCDC17Q96LX7 622 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 FBXO28Q9NVF7 368 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 LIMCH1Q9UPQ0 1083 aa13.51□□□□□ -0.25
SRGAP1-205ENST00000542841 TLR3O15455 904 aaKnown RBP13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 PRKAB2O43741 272 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 DUSP11O75319 330 aaKnown RBP13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 HSP90AA1P07900 732 aaKnown RBP13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 CST5P28325 142 aaPredicted RBP13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 CDK7P50613 346 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 EXOSC10Q01780 885 aaKnown RBP13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 CUL4AQ13619 759 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 STOX1Q6ZVD7 989 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 AMOTL1Q8IY63 956 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 CHMP4CQ96CF2 233 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 AGXT2Q9BYV1 514 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 KRT23Q9C075 422 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 MTIF3Q9H2K0 278 aaKnown RBP13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 SPC25Q9HBM1 224 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 GOPCQ9HD26 462 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 ZHX1Q9UKY1 873 aaPredicted RBP13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 ZNF214Q9UL59 606 aaPredicted RBP13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 PPP1R9AQ9ULJ8 1098 aa13.5□□□□□ -0.25
SRGAP1-205ENST00000542841 PLXNA1Q9UIW2 1896 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 A0A0U1RQG5 324 aaPredicted RBP13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 MYADML2A6NDP7 307 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 RAD21O60216 631 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 SNAI1O95863 264 aaPredicted RBP13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 ASGR1P07306 291 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 SLC3A2P08195 630 aaKnown RBP13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 C6orf222P0C671 652 aaPredicted RBP13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 ACRP10323 421 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 EEF2P13639 858 aaKnown RBP13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 MCM5P33992 734 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 PPARAQ07869 468 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 ADGRE1Q14246 886 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 MAMDC4Q6UXC1 1216 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 MB21D2Q8IYB1 491 aaPredicted RBP13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 DDX11Q96FC9 970 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 TMX3Q96JJ7 454 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 KANSL2Q9H9L4 492 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 SLC28A3Q9HAS3 691 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 TAF6LQ9Y6J9 622 aa13.49□□□□□ -0.25
SRGAP1-205ENST00000542841 XIRP2A4UGR9 3374 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 ARVCFO00192 962 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 FGRP09769 529 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 CDK8P49336 464 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 HAND2P61296 217 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 ACVR2BQ13705 512 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 REPS2Q8NFH8 660 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 HERVK_113Q902F9 699 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 C1QTNF1Q9BXJ1 281 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 TEX13BQ9BXU2 312 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 PPP1R12CQ9BZL4 782 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 COL11A1P12107 1806 aaPredicted RBP13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 PARP14Q460N5 1801 aa13.48□□□□□ -0.25
SRGAP1-205ENST00000542841 GNASQ5JWF2 1037 aa13.47□□□□□ -0.25
SRGAP1-205ENST00000542841 FAM83BQ5T0W9 1011 aa13.47□□□□□ -0.25
SRGAP1-205ENST00000542841 SNRNP48Q6IEG0 339 aaKnown RBP13.47□□□□□ -0.25
SRGAP1-205ENST00000542841 CTR9Q6PD62 1173 aa13.47□□□□□ -0.25
SRGAP1-205ENST00000542841 ZNF467Q7Z7K2 595 aaPredicted RBP13.47□□□□□ -0.25
SRGAP1-205ENST00000542841 TBC1D10CQ8IV04 446 aa13.47□□□□□ -0.25
SRGAP1-205ENST00000542841 FAM126BQ8IXS8 530 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms