RNA–Protein interactions for RNA: ENST00000542428.1

AC009509.3-201, humanhuman

BASIC

Gene AC009509.3, Length 314 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.3-201ENST00000542428 FBXO11Q86XK2 927 aa12.09□□□□□ -0.47
AC009509.3-201ENST00000542428 SHCBP1Q8NEM2 672 aa12.09□□□□□ -0.47
AC009509.3-201ENST00000542428 IL27Q8NEV9 243 aa12.09□□□□□ -0.47
AC009509.3-201ENST00000542428 ZSCAN31Q96LW9 406 aaPredicted RBP12.09□□□□□ -0.47
AC009509.3-201ENST00000542428 ABCB11O95342 1321 aa12.09□□□□□ -0.47
AC009509.3-201ENST00000542428 K7ELQ4 463 aaPredicted RBP12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 NFIBO00712 420 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 OPLAHO14841 1288 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 FKTNO75072 461 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 LBX1P52954 281 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 CCNA1P78396 465 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 PKN1Q16512 942 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 TYW1BQ6NUM6 668 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 CPLX2Q6PUV4 134 aaKnown RBP12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 GPR142Q7Z601 462 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 SHISA4Q96DD7 197 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 ERO1AQ96HE7 468 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 AMNQ9BXJ7 453 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 ACAD9Q9H845 621 aa12.08□□□□□ -0.48
AC009509.3-201ENST00000542428 PNMA6FA0A0J9YX94 578 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 TNPO2O14787 897 aaKnown RBP12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 CDKL5O76039 1030 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 SLC25A27O95847 323 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 SCG2P13521 617 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 MAPK4P31152 587 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 COPB2P35606 906 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 PSMC4P43686 418 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 CTCFP49711 727 aaPredicted RBP12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 FCGRTP55899 365 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 PFKFB3Q16875 520 aaPredicted RBP12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 HEATR3Q7Z4Q2 680 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 HSCBQ8IWL3 235 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 TRIM22Q8IYM9 498 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 CLEC4DQ8WXI8 215 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 SNX21Q969T3 373 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 COA7Q96BR5 231 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 AIFM3Q96NN9 605 aa12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 A1CFQ9NQ94 594 aaKnown RBP12.07□□□□□ -0.48
AC009509.3-201ENST00000542428 hCG_1984214I3L0E3 225 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 STXBP3O00186 592 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 PRPF3O43395 683 aaKnown RBP12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 DEXIO95424 95 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 SSRP1Q08945 709 aaKnown RBP12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 GRB14Q14449 540 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 TKFCQ3LXA3 575 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 ZNF713Q8N859 430 aaPredicted RBP12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 CHST13Q8NET6 341 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 SMARCC2Q8TAQ2 1214 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 DDX11Q96FC9 970 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 TRERF1Q96PN7 1200 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 MMP19Q99542 508 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 MROH8Q9H579 483 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 CWC22Q9HCG8 908 aaKnown RBP12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 RBM27Q9P2N5 1060 aaKnown RBP12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 PCDHA1Q9Y5I3 950 aa12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 V9GY48 417 aaPredicted RBP12.06□□□□□ -0.48
AC009509.3-201ENST00000542428 FDPSP14324 419 aaKnown RBP12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 PTPREP23469 700 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 FOSBP53539 338 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 NAPAP54920 295 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 AKAP17AQ02040 695 aaKnown RBP12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 PRKCZQ05513 592 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 CUL4AQ13619 759 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 KIF22Q14807 665 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 NSMFQ6X4W1 530 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 PLEKHH3Q7Z736 793 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 CCAR1Q8IX12 1150 aaKnown RBP12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 SOCS4Q8WXH5 440 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 BARHL2Q9NY43 387 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 VPS54Q9P1Q0 977 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 ORC3Q9UBD5 711 aaPredicted RBP12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 FBXO40Q9UH90 709 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 PNMA2Q9UL42 364 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 GABRQQ9UN88 632 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 IVNS1ABPQ9Y6Y0 642 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 ASTN1O14525 1302 aa12.05□□□□□ -0.48
AC009509.3-201ENST00000542428 ADORA2AP29274 412 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 GHRHRQ02643 423 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 KCTD2Q14681 263 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 OTOP1Q7RTM1 612 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 FGD4Q96M96 766 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 APBA2Q99767 749 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 GJB4Q9NTQ9 266 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 CYP39A1Q9NYL5 469 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 MRPL11Q9Y3B7 192 aaKnown RBP12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 TRIM17Q9Y577 477 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 PFASO15067 1338 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 ARID2Q68CP9 1835 aa12.04□□□□□ -0.48
AC009509.3-201ENST00000542428 ADAMTS3O15072 1205 aa12.03□□□□□ -0.48
AC009509.3-201ENST00000542428 CFBP00751 764 aa12.03□□□□□ -0.48
AC009509.3-201ENST00000542428 PGK2P07205 417 aa12.03□□□□□ -0.48
AC009509.3-201ENST00000542428 FCER1AP12319 257 aa12.03□□□□□ -0.48
AC009509.3-201ENST00000542428 HSD17B4P51659 736 aa12.03□□□□□ -0.48
AC009509.3-201ENST00000542428 RPS6P62753 249 aaKnown RBP12.03□□□□□ -0.48
AC009509.3-201ENST00000542428 HMGN5P82970 282 aaKnown RBP12.03□□□□□ -0.48
AC009509.3-201ENST00000542428 UBE2SQ16763 222 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms