RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	GLG1	Q92896	1179 aa		13.83	□□□□□ -0.19
ABCB8-222	ENST00000542328	IFT74	Q96LB3	600 aa		13.83	□□□□□ -0.19
ABCB8-222	ENST00000542328	RTEL1	Q9NZ71	1219 aa		13.83	□□□□□ -0.19
ABCB8-222	ENST00000542328	NOD1	Q9Y239	953 aa		13.83	□□□□□ -0.19
ABCB8-222	ENST00000542328	AKR1B10	O60218	316 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	SSR1	P43307	286 aa	Known RBP	13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	SMTN	P53814	917 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	HMGCS2	P54868	508 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	NR5A1	Q13285	461 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	TMCO3	Q6UWJ1	677 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	ZNF280C	Q8ND82	737 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	CPVL	Q9H3G5	476 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	EIF3J	O75822	258 aa	Known RBP	13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	PTGS1	P23219	599 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	ZNF445	P59923	1031 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	PPP1R18	Q6NYC8	613 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	PPP2R3B	Q9Y5P8	575 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	TCRBV5S4A2T	A0A5A2	114 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	GOLGA6L9	A6NEM1	432 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	WTIP	A6NIX2	430 aa	Predicted RBP	13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	POTEJ	P0CG39	1038 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	TEC	P42680	631 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	NBPF9	Q3BBW0	867 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	TPH2	Q8IWU9	490 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	ANKRD13A	Q8IZ07	590 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	MRI	Q9BWK5	157 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	CLSTN2	Q9H4D0	955 aa		13.83	□□□□□ -0.2
ABCB8-222	ENST00000542328	SCN11A	Q9UI33	1791 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	WDR46	O15213	610 aa	Known RBP	13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	VIL1	P09327	827 aa	Known RBP	13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	USP8	P40818	1118 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	FAM193A	P78312	1265 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	AP3B2	Q13367	1082 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	CEP135	Q66GS9	1140 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	OTUD6A	Q7L8S5	288 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	VCPKMT	Q9H867	229 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	ABCB11	O95342	1321 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	NDUFB10	O96000	172 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	CDC27	P30260	824 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	SNAP25	P60880	206 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	SLC39A14	Q15043	492 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	CNNM4	Q6P4Q7	775 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	EHD4	Q9H223	541 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	LONP1	P36776	959 aa	Known RBP	13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	ZNF543	Q08ER8	600 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	QRICH1	Q2TAL8	776 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	CENPH	Q9H3R5	247 aa		13.82	□□□□□ -0.2
ABCB8-222	ENST00000542328	MYL5	Q02045	173 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	SPDYE2	Q495Y8	402 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	RNF207	Q6ZRF8	634 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	ADGRA1	Q86SQ6	560 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	SPZ1	Q9BXG8	430 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	ANO3	Q9BYT9	981 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	RAVER2	Q9HCJ3	691 aa	Known RBP	13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.81	□□□□□ -0.2	2e-8	■■■■■ 428.7
ABCB8-222	ENST00000542328	KCNG1	Q9UIX4	513 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	SCAF8	Q9UPN6	1271 aa	Known RBP	13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	GOLGA6L10	A6NI86	522 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	CMA1	P23946	247 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	RPL13	P26373	211 aa	Known RBP	13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	UBXN2A	P68543	259 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	MTMR2	Q13614	643 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	SNRNP48	Q6IEG0	339 aa	Known RBP	13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	SYT17	Q9BSW7	474 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	WDR11	Q9BZH6	1224 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	POLR3E	Q9NVU0	708 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.81	□□□□□ -0.2	9e-7	■□□□□ 9.3
ABCB8-222	ENST00000542328	MRVI1	Q9Y6F6	885 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	PAFAH1B1	P43034	410 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	UBE2S	Q16763	222 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	CCND2	P30279	289 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	COPB2	P35606	906 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	DNM2	P50570	870 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	LRCH2	Q5VUJ6	765 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	FKBP1C	Q5VVH2	108 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	ADGRF4	Q8IZF3	695 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	CCDC102A	Q96A19	550 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	SPAG5	Q96R06	1193 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	KCNQ5	Q9NR82	932 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	RNF146	Q9NTX7	359 aa		13.81	□□□□□ -0.2
ABCB8-222	ENST00000542328	NWD2	Q9ULI1	1742 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	CCDC169	A6NNP5	214 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	ANTXR2	P58335	489 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	PGBD1	Q96JS3	809 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	ZSWIM4	Q9H7M6	989 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	MMRN2	Q9H8L6	949 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	CLIC4	Q9Y696	253 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	COG2	Q14746	738 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	CLEC10A	Q8IUN9	316 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	IDI2	Q9BXS1	227 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	WNT10B	O00744	389 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	CNGA1	P29973	690 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	HS1BP3	Q53T59	392 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	SCYL3	Q8IZE3	742 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	ZNF577	Q9BSK1	485 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	PCDHA7	Q9UN72	937 aa		13.8	□□□□□ -0.2
ABCB8-222	ENST00000542328	PLCH1	Q4KWH8	1693 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms