RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 DCAF4Q8WV16 495 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 CUL5Q93034 780 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 MTMR8Q96EF0 704 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 PPIP5K2O43314 1243 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 EEF2P13639 858 aaKnown RBP12.2□□□□□ -0.46
NECAP1-206ENST00000542095 PLCG1P19174 1290 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 TECP42680 631 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 EN1Q05925 392 aaPredicted RBP12.2□□□□□ -0.46
NECAP1-206ENST00000542095 SPAG1Q07617 926 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 CALCRLQ16602 461 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 PTPN21Q16825 1174 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 GRIPAP1Q4V328 841 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 SH3BP5LQ7L8J4 393 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 NELFBQ8WX92 580 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 PPP1R13BQ96KQ4 1090 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 CAMKK2Q96RR4 588 aa12.2□□□□□ -0.46
NECAP1-206ENST00000542095 FAM196BA6NMK8 535 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 USP17L10C9JJH3 530 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 ENTPD3O75355 529 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 SLC16A2P36021 539 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
NECAP1-206ENST00000542095 STIM1Q13586 685 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 TMEM266Q2M3C6 531 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 TATDN1Q6P1N9 297 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 TMEM179Q6ZVK1 233 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 APTXQ7Z2E3 356 aaKnown RBP12.19□□□□□ -0.46
NECAP1-206ENST00000542095 FCHSD1Q86WN1 690 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 IGSF22Q8N9C0 903 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 ANKRD20A12PQ8NF67 263 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 FBXO41Q8TF61 875 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 ZNF592Q92610 1267 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 CCDC47Q96A33 483 aaKnown RBP12.19□□□□□ -0.46
NECAP1-206ENST00000542095 CALML4Q96GE6 196 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 PLIN2Q99541 437 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 GLT8D2Q9H1C3 349 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 ADD3Q9UEY8 706 aaKnown RBP12.19□□□□□ -0.46
NECAP1-206ENST00000542095 COL2A1P02458 1487 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-206ENST00000542095 PPP1R11O60927 126 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-206ENST00000542095 TUBB4AP04350 444 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 SLURP2P0DP57 97 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 PRCPP42785 496 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 SLC1A4P43007 532 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 CLK2P49760 499 aaKnown RBP12.19□□□□□ -0.46
NECAP1-206ENST00000542095 KMT5BQ4FZB7 885 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 SLFN13Q68D06 897 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 MTMR9Q96QG7 549 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 RAB34Q9BZG1 259 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 GDAQ9Y2T3 454 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 ATRNL1Q5VV63 1379 aa12.19□□□□□ -0.46
NECAP1-206ENST00000542095 ARHGAP6O43182 974 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 KLRC4O43908 158 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 RAD21O60216 631 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 RHOBTB3O94955 611 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 TXKP42681 527 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 TNNI2P48788 182 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 FXR2P51116 673 aaKnown RBP eCLIP12.18□□□□□ -0.46
NECAP1-206ENST00000542095 AMPD3Q01432 767 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 ICA1Q05084 483 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 BAG1Q99933 345 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-206ENST00000542095 GTPBP4Q9BZE4 634 aaKnown RBP12.18□□□□□ -0.46
NECAP1-206ENST00000542095 TDRD3Q9H7E2 651 aaKnown RBP12.18□□□□□ -0.46
NECAP1-206ENST00000542095 LIMA1Q9UHB6 759 aaKnown RBP12.18□□□□□ -0.46
NECAP1-206ENST00000542095 C21orf2O43822 256 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 RBM10P98175 930 aaKnown RBP12.18□□□□□ -0.46
NECAP1-206ENST00000542095 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 SEPT2Q15019 361 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 ABCB5Q2M3G0 1257 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 PPP4R3AQ6IN85 833 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 ADSSL1Q8N142 457 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 TC2NQ8N9U0 490 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 KIF18AQ8NI77 898 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 PSTPIP2Q9H939 334 aa12.18□□□□□ -0.46
NECAP1-206ENST00000542095 YDJCA8MPS7 323 aa12.17□□□□□ -0.46
NECAP1-206ENST00000542095 H7C1D1 291 aa12.17□□□□□ -0.46
NECAP1-206ENST00000542095 TEX33O43247 280 aa12.17□□□□□ -0.46
NECAP1-206ENST00000542095 RRP9O43818 475 aaKnown RBP12.17□□□□□ -0.46
NECAP1-206ENST00000542095 SLC37A4O43826 429 aa12.17□□□□□ -0.46
NECAP1-206ENST00000542095 STX10O60499 249 aa12.17□□□□□ -0.46
NECAP1-206ENST00000542095 TDP2O95551 362 aa12.17□□□□□ -0.46
NECAP1-206ENST00000542095 UBE2SQ16763 222 aa12.17□□□□□ -0.46
NECAP1-206ENST00000542095 TMEM139Q8IV31 216 aa12.17□□□□□ -0.46
NECAP1-206ENST00000542095 NAP1L4Q99733 375 aaKnown RBP12.17□□□□□ -0.46
NECAP1-206ENST00000542095 C7orf25Q9BPX7 421 aa12.17□□□□□ -0.46
NECAP1-206ENST00000542095 MMTAG2Q9BU76 263 aaKnown RBP12.17□□□□□ -0.46
NECAP1-206ENST00000542095 LRWD1Q9UFC0 647 aa12.17□□□□□ -0.46
NECAP1-206ENST00000542095 AKR1B15C9JRZ8 316 aaPredicted RBP12.16□□□□□ -0.46
NECAP1-206ENST00000542095 PSMA7O14818 248 aa12.16□□□□□ -0.46
NECAP1-206ENST00000542095 ZSCAN12O43309 604 aa12.16□□□□□ -0.46
NECAP1-206ENST00000542095 CTIFO43310 598 aaKnown RBP12.16□□□□□ -0.46
NECAP1-206ENST00000542095 PBX1P40424 430 aa12.16□□□□□ -0.46
NECAP1-206ENST00000542095 ADKP55263 362 aaKnown RBP12.16□□□□□ -0.46
NECAP1-206ENST00000542095 PDIA5Q14554 519 aa12.16□□□□□ -0.46
NECAP1-206ENST00000542095 KRT31Q15323 416 aa12.16□□□□□ -0.46
NECAP1-206ENST00000542095 QRICH1Q2TAL8 776 aa12.16□□□□□ -0.46
NECAP1-206ENST00000542095 CCDC93Q567U6 631 aa12.16□□□□□ -0.46
NECAP1-206ENST00000542095 MTERF4Q7Z6M4 381 aaKnown RBP12.16□□□□□ -0.46
NECAP1-206ENST00000542095 PPFIBP1Q86W92 1011 aa12.16□□□□□ -0.46
NECAP1-206ENST00000542095 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms