RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 NAPAP54920 295 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 RNASE9P60153 205 aaKnown RBP17.11■□□□□ 0.33
CNOT9-208ENST00000542068 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
CNOT9-208ENST00000542068 USP17L2Q6R6M4 530 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 DTHD1Q6ZMT9 781 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 FAM196AQ6ZSG2 479 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 TUBGCP2Q9BSJ2 902 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 NYXQ9GZU5 481 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 ITIH6Q6UXX5 1313 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 TOGARAM1Q9Y4F4 1720 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 G3V3G9 751 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 SF3B3Q15393 1217 aaKnown RBP17.11■□□□□ 0.33
CNOT9-208ENST00000542068 DCAF8Q5TAQ9 597 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 CLEC4GQ6UXB4 293 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 CNBD1Q8NA66 436 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 HAUS4Q9H6D7 363 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 NHEJ1Q9H9Q4 299 aaPredicted RBP17.11■□□□□ 0.33
CNOT9-208ENST00000542068 RMND1Q9NWS8 449 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 HPCAL4Q9UM19 191 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 CNTNAP5Q8WYK1 1306 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 PSMA7O14818 248 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 KRT86O43790 486 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 CLEC10AQ8IUN9 316 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 RRP36Q96EU6 259 aaKnown RBP17.11■□□□□ 0.33
CNOT9-208ENST00000542068 DNAJC5Q9H3Z4 198 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 DEF6Q9H4E7 631 aa17.11■□□□□ 0.33
CNOT9-208ENST00000542068 TAF1P21675 1872 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 H7C1D1 291 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 FCER1AP12319 257 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 ASIC1P78348 528 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 BLIDQ8IZY5 108 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 SELENOOQ9BVL4 669 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 ANKRD2Q9GZV1 360 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 FAM170AA1A519 330 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 LGALS16A8MUM7 142 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 UBAP1LF5GYI3 381 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 BAG3O95817 575 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 PDE4DQ08499 809 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 TUBB2AQ13885 445 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 TNFRSF25Q93038 417 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 TUBB2BQ9BVA1 445 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 NOC4LQ9BVI4 516 aaKnown RBP17.1■□□□□ 0.33
CNOT9-208ENST00000542068 FRMPD2Q68DX3 1309 aaPredicted RBP17.1■□□□□ 0.33
CNOT9-208ENST00000542068 EP400Q96L91 3159 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 ECM29Q5VYK3 1845 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 MYH2Q9UKX2 1941 aa17.1■□□□□ 0.33
CNOT9-208ENST00000542068 NCK2O43639 380 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 SSBP05455 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
CNOT9-208ENST00000542068 CCT5P48643 541 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 TRAPPC3LQ5T215 181 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 FBXO33Q7Z6M2 555 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 ADSSL1Q8N142 457 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 CCDC42Q96M95 316 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 MMRN2Q9H8L6 949 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 PLEKHG2Q9H7P9 1386 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 MOCS3O95396 460 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 TRIM14Q14142 442 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 DISC1Q9NRI5 854 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 SPATA31A5Q5VU36 1347 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 SPATA31A7Q8IWB4 1347 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 SLIT2O94813 1529 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 LRRC10BA6NIK2 292 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 MPHOSPH10O00566 681 aaKnown RBP17.09■□□□□ 0.33
CNOT9-208ENST00000542068 CYLC1P35663 651 aaPredicted RBP17.09■□□□□ 0.33
CNOT9-208ENST00000542068 KIF5AQ12840 1032 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 MAP9Q49MG5 647 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 C2CD5Q86YS7 1000 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 MICALL1Q8N3F8 863 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 COG1Q8WTW3 980 aa17.09■□□□□ 0.33
CNOT9-208ENST00000542068 ARPP21Q9UBL0 812 aaPredicted RBP17.09■□□□□ 0.33
CNOT9-208ENST00000542068 CCNT1O60563 726 aaKnown RBP17.08■□□□□ 0.33
CNOT9-208ENST00000542068 KRT83P78385 493 aa17.08■□□□□ 0.33
CNOT9-208ENST00000542068 SOGA3Q5TF21 947 aa17.08■□□□□ 0.33
CNOT9-208ENST00000542068 CNOT6LQ96LI5 555 aaKnown RBP17.08■□□□□ 0.33
CNOT9-208ENST00000542068 SLC39A2Q9NP94 309 aa17.08■□□□□ 0.33
CNOT9-208ENST00000542068 ATP8A2Q9NTI2 1148 aa17.08■□□□□ 0.33
CNOT9-208ENST00000542068 EXOC1Q9NV70 894 aa17.08■□□□□ 0.33
CNOT9-208ENST00000542068 MYO1AQ9UBC5 1043 aa17.08■□□□□ 0.33
CNOT9-208ENST00000542068 BIN2Q9UBW5 565 aaPredicted RBP17.08■□□□□ 0.33
CNOT9-208ENST00000542068 SAMM50Q9Y512 469 aa17.08■□□□□ 0.33
CNOT9-208ENST00000542068 NUP98P52948 1817 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 KLRF2D3W0D1 207 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 SPA17Q15506 151 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 PTPROQ16827 1216 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 KCTD16Q68DU8 428 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 PACS2Q86VP3 889 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 MED4Q9NPJ6 270 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 NARFQ9UHQ1 456 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
CNOT9-208ENST00000542068 GOLGA6CA6NDK9 693 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 GOLGA6BA6NDN3 693 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 DDAH1O94760 285 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 GOLGA6DP0CG33 693 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 STK4Q13043 487 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 TTC31Q49AM3 519 aaPredicted RBP17.08■□□□□ 0.32
CNOT9-208ENST00000542068 NAALADL2Q58DX5 795 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 SPTY2D1Q68D10 685 aaPredicted RBP17.08■□□□□ 0.32
CNOT9-208ENST00000542068 ANKRD40Q6AI12 368 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms