RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 MKRN1Q9UHC7 482 aaKnown RBP10.26□□□□□ -0.77
THBS3-211ENST00000541990 CACNA1SQ13698 1873 aa10.26□□□□□ -0.77
THBS3-211ENST00000541990 CLRN2A0PK11 232 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 ZBTB43O43298 467 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 CHRM1P11229 460 aaPredicted RBP10.25□□□□□ -0.77
THBS3-211ENST00000541990 RASSF7Q02833 373 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 WHAMMP3Q1A5X7 153 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 CDKAL1Q5VV42 579 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 CDAN1Q8IWY9 1227 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 MSL3Q8N5Y2 521 aaKnown RBP10.25□□□□□ -0.77
THBS3-211ENST00000541990 VPS16Q9H269 839 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 LY9Q9HBG7 655 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 ABHD10Q9NUJ1 306 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 BAZ2AQ9UIF9 1905 aaKnown RBP10.25□□□□□ -0.77
THBS3-211ENST00000541990 ZNF185O15231 689 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 TRIM29Q14134 588 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 EARS2Q5JPH6 523 aaKnown RBP10.25□□□□□ -0.77
THBS3-211ENST00000541990 IGDCC4Q8TDY8 1250 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 GEMIN8Q9NWZ8 242 aaKnown RBP10.25□□□□□ -0.77
THBS3-211ENST00000541990 TAB2Q9NYJ8 693 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 CTNND2Q9UQB3 1225 aa10.25□□□□□ -0.77
THBS3-211ENST00000541990 VEGFAP15692 232 aaPredicted RBP10.24□□□□□ -0.77
THBS3-211ENST00000541990 SPATA1Q5VX52 437 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 WDR93Q6P2C0 686 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 KCNV1Q6PIU1 500 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 SPATA20Q8TB22 786 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 CRNKL1Q9BZJ0 848 aaKnown RBP10.24□□□□□ -0.77
THBS3-211ENST00000541990 BLZF1Q9H2G9 400 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 MED4Q9NPJ6 270 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 COL11A2P13942 1736 aaPredicted RBP10.24□□□□□ -0.77
THBS3-211ENST00000541990 PPP1R3GB7ZBB8 358 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 RAD21O60216 631 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 EGFRP00533 1210 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 MMP1P03956 469 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 USP14P54578 494 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 KRT31Q15323 416 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 FKBP15Q5T1M5 1219 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 TEX2Q8IWB9 1127 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 CNKSR1Q969H4 720 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 NAA15Q9BXJ9 866 aaKnown RBP10.24□□□□□ -0.77
THBS3-211ENST00000541990 TDRD3Q9H7E2 651 aaKnown RBP10.24□□□□□ -0.77
THBS3-211ENST00000541990 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.24□□□□□ -0.77
THBS3-211ENST00000541990 CENPFP49454 3210 aa10.24□□□□□ -0.77
THBS3-211ENST00000541990 PDE2AO00408 941 aaPredicted RBP10.23□□□□□ -0.77
THBS3-211ENST00000541990 AARSP49588 968 aaKnown RBP eCLIP10.23□□□□□ -0.77
THBS3-211ENST00000541990 RHBDL3P58872 404 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 TRAPPC11Q7Z392 1133 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 TICAM2Q86XR7 235 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
THBS3-211ENST00000541990 NCAPGQ9BPX3 1015 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 COA1Q9GZY4 146 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 USP40Q9NVE5 1235 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 DACH1Q9UI36 760 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 CPP00450 1065 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 ERCC5P28715 1186 aaPredicted RBP10.23□□□□□ -0.77
THBS3-211ENST00000541990 DNAJC21Q5F1R6 531 aaKnown RBP10.23□□□□□ -0.77
THBS3-211ENST00000541990 EFCAB13Q8IY85 973 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 NUP88Q99567 741 aaPredicted RBP10.23□□□□□ -0.77
THBS3-211ENST00000541990 GBP3Q9H0R5 595 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 BRMS1Q9HCU9 246 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 CABP5Q9NP86 173 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 MAPK8IP1Q9UQF2 711 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 SAMM50Q9Y512 469 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 TNKSO95271 1327 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 SEMA3EO15041 775 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 CDKL5O76039 1030 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 GOLGA8HP0CJ92 632 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 MYH8P13535 1937 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 FECHP22830 423 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 KRT9P35527 623 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 PRELPP51888 382 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 SSRP1Q08945 709 aaKnown RBP10.23□□□□□ -0.77
THBS3-211ENST00000541990 DLK2Q6UY11 383 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 CNGA4Q8IV77 575 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 CCDC148Q8NFR7 591 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 COG1Q8WTW3 980 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 PAGE5Q96GU1 130 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 DUOX1Q9NRD9 1551 aa10.23□□□□□ -0.77
THBS3-211ENST00000541990 RCCD1A6NED2 376 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 TSPY2A6NKD2 308 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 PSMD14O00487 310 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 HERVK_113P62684 666 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 TFAP4Q01664 338 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 C2orf54Q08AI8 447 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 STIM1Q13586 685 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 STYK1Q6J9G0 422 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 MMS22LQ6ZRQ5 1243 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 ENAHQ8N8S7 591 aaPredicted RBP10.22□□□□□ -0.77
THBS3-211ENST00000541990 TRIML1Q8N9V2 468 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 PRMT6Q96LA8 375 aaPredicted RBP10.22□□□□□ -0.77
THBS3-211ENST00000541990 SELENOOQ9BVL4 669 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 STX8Q9UNK0 236 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 FZD1Q9UP38 647 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 SRPRBQ9Y5M8 271 aaKnown RBP10.22□□□□□ -0.77
THBS3-211ENST00000541990 N4BP3O15049 544 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 FMNL1O95466 1100 aaPredicted RBP10.22□□□□□ -0.77
THBS3-211ENST00000541990 ATP2B2Q01814 1243 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 SPTY2D1Q68D10 685 aaPredicted RBP10.22□□□□□ -0.77
THBS3-211ENST00000541990 CDC42EP5Q6NZY7 148 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms