RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 FAM193AP78312 1265 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 ABCB5Q2M3G0 1257 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 CCDC92Q53HC0 331 aaPredicted RBP6.58□□□□□ -1.36
DDB1-219ENST00000541513 OTOP3Q7RTS5 596 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 PNMA8AQ86V59 439 aaPredicted RBP6.58□□□□□ -1.36
DDB1-219ENST00000541513 ANKLE2Q86XL3 938 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 TRIM22Q8IYM9 498 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 ZSCAN1Q8NBB4 408 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 RHPN1Q8TCX5 695 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 SUSD3Q96L08 255 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 CDK15Q96Q40 435 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 NAA15Q9BXJ9 866 aaKnown RBP6.58□□□□□ -1.36
DDB1-219ENST00000541513 IL21Q9HBE4 155 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 SUCOQ9UBS9 1254 aaKnown RBP6.58□□□□□ -1.36
DDB1-219ENST00000541513 SALL4Q9UJQ4 1053 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 PCDHB5Q9Y5E4 795 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 DIP2AQ14689 1571 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 A0A1W2PQU0 124 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 A6NCN8 305 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 PAGE1O75459 146 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 PRKD3O94806 890 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 CNOT4O95628 575 aaKnown RBP6.57□□□□□ -1.36
DDB1-219ENST00000541513 FAM200BP0CF97 657 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 ADD1P35611 737 aaKnown RBP6.57□□□□□ -1.36
DDB1-219ENST00000541513 GRK6P43250 576 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 ZNF143P52747 638 aaPredicted RBP6.57□□□□□ -1.36
DDB1-219ENST00000541513 ERVK-21P61565 698 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 TAF11Q15544 211 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 PRR16Q569H4 304 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 RPS26P11Q5JNZ5 115 aaPredicted RBP6.57□□□□□ -1.36
DDB1-219ENST00000541513 INTS11Q5TA45 600 aaKnown RBP6.57□□□□□ -1.36
DDB1-219ENST00000541513 CASC1Q6TDU7 716 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 BRINP3Q76B58 766 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 MYLK4Q86YV6 388 aaPredicted RBP6.57□□□□□ -1.36
DDB1-219ENST00000541513 CMTR1Q8N1G2 835 aaKnown RBP6.57□□□□□ -1.36
DDB1-219ENST00000541513 GSTCDQ8NEC7 633 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 PARD3BQ8TEW8 1205 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 TMEM40Q8WWA1 233 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 GCC1Q96CN9 775 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 MTRQ99707 1265 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 KIAA1586Q9HCI6 787 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 SEC31BQ9NQW1 1179 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 POLR3KQ9Y2Y1 108 aaPredicted RBP6.57□□□□□ -1.36
DDB1-219ENST00000541513 PCDHGB3Q9Y5G1 929 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 LRRFIP2Q9Y608 721 aaKnown RBP6.57□□□□□ -1.36
DDB1-219ENST00000541513 MYOM2P54296 1465 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 SETBP1Q9Y6X0 1596 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 PLEKHG1Q9ULL1 1385 aa6.57□□□□□ -1.36
DDB1-219ENST00000541513 NRXN1Q9ULB1 1477 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 MAP3K6O95382 1288 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 LTFP02788 710 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 PYGMP11217 842 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 RHCEP18577 417 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 LTKP29376 864 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 NEK4P51957 841 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 USP14P54578 494 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 RHDQ02161 417 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 CENPCQ03188 943 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 FAPQ12884 760 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 PDCD2Q16342 344 aaPredicted RBP6.56□□□□□ -1.36
DDB1-219ENST00000541513 TUBB8Q3ZCM7 444 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 INTS3Q68E01 1043 aaKnown RBP6.56□□□□□ -1.36
DDB1-219ENST00000541513 LRRC69Q6ZNQ3 347 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 NLRP13Q86W25 1043 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 CMTR2Q8IYT2 770 aaKnown RBP6.56□□□□□ -1.36
DDB1-219ENST00000541513 OR8H2Q8N162 312 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 OR2W6PQ8NHA6 318 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 KLHL6Q8WZ60 621 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 JARID2Q92833 1246 aaPredicted RBP6.56□□□□□ -1.36
DDB1-219ENST00000541513 PAWRQ96IZ0 340 aaKnown RBP6.56□□□□□ -1.36
DDB1-219ENST00000541513 SGCZQ96LD1 299 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 AARSD1Q9BTE6 412 aaKnown RBP6.56□□□□□ -1.36
DDB1-219ENST00000541513 ZDHHC3Q9NYG2 299 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 PDP2Q9P2J9 529 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 USP20Q9Y2K6 914 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 TNPO3Q9Y5L0 923 aaKnown RBP6.56□□□□□ -1.36
DDB1-219ENST00000541513 NRXN3Q9Y4C0 1643 aa6.56□□□□□ -1.36
DDB1-219ENST00000541513 NPHP4O75161 1426 aaPredicted RBP6.56□□□□□ -1.36
DDB1-219ENST00000541513 SETD1AO15047 1707 aaKnown RBP6.56□□□□□ -1.36
DDB1-219ENST00000541513 CHD2O14647 1828 aaKnown RBP6.55□□□□□ -1.36
DDB1-219ENST00000541513 PRR36Q9H6K5 1346 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 LTBP3Q9NS15 1303 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 LAMC1P11047 1609 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 HRGP04196 525 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 FGFR1P11362 822 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 NCAM1P13591 858 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 FSHRP23945 695 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 LAMC2Q13753 1193 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 HSP90AA2PQ14568 343 aaPredicted RBP6.55□□□□□ -1.36
DDB1-219ENST00000541513 RGL3Q3MIN7 710 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 MSL1Q68DK7 614 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 HEATR6Q6AI08 1181 aaKnown RBP6.55□□□□□ -1.36
DDB1-219ENST00000541513 B3GNT9Q6UX72 402 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 BRAPQ7Z569 592 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 SRGAP1Q7Z6B7 1085 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 SLC41A1Q8IVJ1 513 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 ACRBPQ8NEB7 543 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 RHBDD1Q8TEB9 315 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 FRS2Q8WU20 508 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms