RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 IRX5P78411 483 aaPredicted RBP14.56□□□□□ -0.08
SNHG1-216ENST00000541416 BEX3Q00994 111 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 CNTN2Q02246 1040 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 AAK1Q2M2I8 961 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 IQSEC1Q6DN90 963 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 CXCL17Q6UXB2 119 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 SLC43A3Q8NBI5 491 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 NEDD1Q8NHV4 660 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 ADAMTS19Q8TE59 1207 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 STAG1Q8WVM7 1258 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 OSBP2Q969R2 916 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 TRERF1Q96PN7 1200 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 KATNBL1Q9H079 304 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 A1CFQ9NQ94 594 aaKnown RBP14.56□□□□□ -0.08
SNHG1-216ENST00000541416 Q9Y3F1 56 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 PLIN4Q96Q06 1357 aa14.56□□□□□ -0.08
SNHG1-216ENST00000541416 DYNC1LI2O43237 492 aaPredicted RBP14.55□□□□□ -0.08
SNHG1-216ENST00000541416 PLA2G6O60733 806 aa14.55□□□□□ -0.08
SNHG1-216ENST00000541416 PFKMP08237 780 aa14.55□□□□□ -0.08
SNHG1-216ENST00000541416 SUPT20HL2P0C7V6 817 aa14.55□□□□□ -0.08
SNHG1-216ENST00000541416 ALAS1P13196 640 aa14.55□□□□□ -0.08
SNHG1-216ENST00000541416 CCDC85BQ15834 202 aaPredicted RBP14.55□□□□□ -0.08
SNHG1-216ENST00000541416 PPP2R2DQ66LE6 453 aa14.55□□□□□ -0.08
SNHG1-216ENST00000541416 OTOP2Q7RTS6 562 aa14.55□□□□□ -0.08
SNHG1-216ENST00000541416 IFNL3Q8IZI9 196 aa14.55□□□□□ -0.08
SNHG1-216ENST00000541416 UHRF1Q96T88 793 aaPredicted RBP14.55□□□□□ -0.08
SNHG1-216ENST00000541416 NAPBQ9H115 298 aa14.55□□□□□ -0.08
SNHG1-216ENST00000541416 NKX2-4Q9H2Z4 354 aa14.55□□□□□ -0.08
SNHG1-216ENST00000541416 GNEQ9Y223 722 aaKnown RBP14.55□□□□□ -0.08
SNHG1-216ENST00000541416 MYO9BQ13459 2157 aa14.55□□□□□ -0.08
SNHG1-216ENST00000541416 CTAGE5O15320 804 aa14.54□□□□□ -0.08
SNHG1-216ENST00000541416 SMARCA5O60264 1052 aaPredicted RBP14.54□□□□□ -0.08
SNHG1-216ENST00000541416 CCL23P55773 120 aa14.54□□□□□ -0.08
SNHG1-216ENST00000541416 TFAP4Q01664 338 aa14.54□□□□□ -0.08
SNHG1-216ENST00000541416 BRDTQ58F21 947 aaPredicted RBP14.54□□□□□ -0.08
SNHG1-216ENST00000541416 AGBL1Q96MI9 1066 aa14.54□□□□□ -0.08
SNHG1-216ENST00000541416 MPHOSPH6Q99547 160 aaKnown RBP14.54□□□□□ -0.08
SNHG1-216ENST00000541416 NOC4LQ9BVI4 516 aaKnown RBP14.54□□□□□ -0.08
SNHG1-216ENST00000541416 EPB41L4AQ9HCS5 686 aaPredicted RBP14.54□□□□□ -0.08
SNHG1-216ENST00000541416 VTA1Q9NP79 307 aa14.54□□□□□ -0.08
SNHG1-216ENST00000541416 CXXC1Q9P0U4 656 aaPredicted RBP14.54□□□□□ -0.08
SNHG1-216ENST00000541416 ADD3Q9UEY8 706 aaKnown RBP14.54□□□□□ -0.08
SNHG1-216ENST00000541416 STX8Q9UNK0 236 aa14.54□□□□□ -0.08
SNHG1-216ENST00000541416 PCDHA11Q9Y5I1 949 aa14.54□□□□□ -0.08
SNHG1-216ENST00000541416 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.53□□□□□ -0.08
SNHG1-216ENST00000541416 ZBBXA8MT70 800 aa14.53□□□□□ -0.08
SNHG1-216ENST00000541416 ERC2O15083 957 aa14.53□□□□□ -0.08
SNHG1-216ENST00000541416 B4GALT4O60513 344 aa14.53□□□□□ -0.08
SNHG1-216ENST00000541416 ACTN1P12814 892 aa14.53□□□□□ -0.08
SNHG1-216ENST00000541416 MCCP23508 829 aa14.53□□□□□ -0.08
SNHG1-216ENST00000541416 RCSD1Q6JBY9 416 aa14.53□□□□□ -0.08
SNHG1-216ENST00000541416 KIAA1211Q6ZU35 1233 aa14.53□□□□□ -0.08
SNHG1-216ENST00000541416 GPHNQ9NQX3 736 aaPredicted RBP14.53□□□□□ -0.08
SNHG1-216ENST00000541416 POLR3EQ9NVU0 708 aa14.53□□□□□ -0.08
SNHG1-216ENST00000541416 XIRP2A4UGR9 3374 aa14.53□□□□□ -0.08
SNHG1-216ENST00000541416 REV3LO60673 3130 aa14.52□□□□□ -0.08
SNHG1-216ENST00000541416 ASTN1O14525 1302 aa14.52□□□□□ -0.08
SNHG1-216ENST00000541416 RAD50Q92878 1312 aa14.52□□□□□ -0.08
SNHG1-216ENST00000541416 LOC102724159A0A0B4J2E5 919 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 SOWAHBA6NEL2 793 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 TSPY2A6NKD2 308 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 GTPBP6O43824 516 aaPredicted RBP14.52□□□□□ -0.09
SNHG1-216ENST00000541416 ATP2A2P16615 1042 aaKnown RBP14.52□□□□□ -0.09
SNHG1-216ENST00000541416 SMPD1P17405 629 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 CPT1AP50416 773 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 ADGRE1Q14246 886 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 PWP2Q15269 919 aaKnown RBP14.52□□□□□ -0.09
SNHG1-216ENST00000541416 NSMFQ6X4W1 530 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 TRPV6Q9H1D0 765 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 CYP39A1Q9NYL5 469 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 PNMA2Q9UL42 364 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 CCPG1Q9ULG6 757 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 TRANK1O15050 2925 aa14.52□□□□□ -0.09
SNHG1-216ENST00000541416 ZNF536O15090 1300 aa14.51□□□□□ -0.09
SNHG1-216ENST00000541416 UMODL1Q5DID0 1318 aa14.51□□□□□ -0.09
SNHG1-216ENST00000541416 M0R2C6 588 aa14.51□□□□□ -0.09
SNHG1-216ENST00000541416 PPARAQ07869 468 aa14.51□□□□□ -0.09
SNHG1-216ENST00000541416 TMEM67Q5HYA8 995 aa14.51□□□□□ -0.09
SNHG1-216ENST00000541416 EEPD1Q7L9B9 569 aa14.51□□□□□ -0.09
SNHG1-216ENST00000541416 FBXO16Q8IX29 292 aaPredicted RBP14.51□□□□□ -0.09
SNHG1-216ENST00000541416 ALDH8A1Q9H2A2 487 aaPredicted RBP14.51□□□□□ -0.09
SNHG1-216ENST00000541416 RCAN3Q9UKA8 241 aa14.51□□□□□ -0.09
SNHG1-216ENST00000541416 YBX2Q9Y2T7 364 aaKnown RBP14.51□□□□□ -0.09
SNHG1-216ENST00000541416 GBF1Q92538 1859 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 TTC41PQ6P2S7 1318 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 RFC2P35250 354 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 SKIV2LQ15477 1246 aaKnown RBP14.5□□□□□ -0.09
SNHG1-216ENST00000541416 DUSP28Q4G0W2 176 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 TAPT1Q6NXT6 567 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 KCTD1Q719H9 257 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 MICALL1Q8N3F8 863 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 DCAF4Q8WV16 495 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 FSD1Q9BTV5 496 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 C1QTNF1Q9BXJ1 281 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 WNT8AQ9H1J5 351 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 PDGFCQ9NRA1 345 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 PRR12Q9ULL5 1215 aa14.5□□□□□ -0.09
SNHG1-216ENST00000541416 GRIN2DO15399 1336 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 TNKSO95271 1327 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 B4DLN1 442 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms