RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 JAG2Q9Y219 1238 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 PLIN4Q96Q06 1357 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 ZNF263O14978 683 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 GYS1P13807 737 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 CALML3P27482 149 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 STAT6P42226 847 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 UBXN1Q04323 297 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 KIF4BQ2VIQ3 1234 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 SLC4A8Q2Y0W8 1093 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 PAPD7Q5XG87 772 aaKnown RBP10.72□□□□□ -0.69
CNOT4-212ENST00000541284 SH3RF3Q8TEJ3 882 aaPredicted RBP10.72□□□□□ -0.69
CNOT4-212ENST00000541284 C8orf37Q96NL8 207 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 PDE11AQ9HCR9 933 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 ADAM21Q9UKJ8 722 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 MYH7BA7E2Y1 1941 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 TSPY2A6NKD2 308 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 LRRIQ3A6PVS8 624 aaPredicted RBP10.72□□□□□ -0.69
CNOT4-212ENST00000541284 ATP1A1P05023 1023 aaKnown RBP10.72□□□□□ -0.69
CNOT4-212ENST00000541284 EEF1GP26641 437 aaKnown RBP10.72□□□□□ -0.69
CNOT4-212ENST00000541284 PRPHP41219 470 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 INF2Q27J81 1249 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 SLC44A5Q8NCS7 719 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 LACRTQ9GZZ8 138 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 AGPAT5Q9NUQ2 364 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 SRP68Q9UHB9 627 aaKnown RBP10.72□□□□□ -0.69
CNOT4-212ENST00000541284 MYO6Q9UM54 1294 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 CCDC66A2RUB6 948 aa10.71□□□□□ -0.69
CNOT4-212ENST00000541284 ZSCAN29Q8IWY8 852 aaPredicted RBP10.71□□□□□ -0.69
CNOT4-212ENST00000541284 UBAP1LF5GYI3 381 aa10.71□□□□□ -0.69
CNOT4-212ENST00000541284 OR8K1Q8NGG5 319 aa10.71□□□□□ -0.69
CNOT4-212ENST00000541284 MCM9Q9NXL9 1143 aa10.71□□□□□ -0.69
CNOT4-212ENST00000541284 COL2A1P02458 1487 aaPredicted RBP10.71□□□□□ -0.7
CNOT4-212ENST00000541284 POLRMTO00411 1230 aaKnown RBP10.71□□□□□ -0.7
CNOT4-212ENST00000541284 RHOXF2BP0C7M4 288 aa10.71□□□□□ -0.7
CNOT4-212ENST00000541284 IL1R1P14778 569 aa10.71□□□□□ -0.7
CNOT4-212ENST00000541284 RASA1P20936 1047 aa10.71□□□□□ -0.7
CNOT4-212ENST00000541284 KIF5BP33176 963 aa10.71□□□□□ -0.7
CNOT4-212ENST00000541284 EXOC4Q96A65 974 aa10.71□□□□□ -0.7
CNOT4-212ENST00000541284 MMS19Q96T76 1030 aa10.71□□□□□ -0.7
CNOT4-212ENST00000541284 RHOXF2Q9BQY4 288 aa10.71□□□□□ -0.7
CNOT4-212ENST00000541284 DICER1Q9UPY3 1922 aaKnown RBP10.7□□□□□ -0.7
CNOT4-212ENST00000541284 B4DLN1 442 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 MYL1P05976 194 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 PLCG1P19174 1290 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 STK4Q13043 487 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 SEMA3FQ13275 785 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 COBLL1Q53SF7 1204 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 ANKRD40Q6AI12 368 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 DTHD1Q6ZMT9 781 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 KIAA0895Q8NCT3 520 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 PLIN2Q99541 437 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 TMEM47Q9BQJ4 181 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 TRIM9Q9C026 710 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 NYXQ9GZU5 481 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 ZMYND12Q9H0C1 365 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 CPVLQ9H3G5 476 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 KAT14Q9H8E8 782 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 POTEB2H3BUK9 544 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 PDE2AO00408 941 aaPredicted RBP10.7□□□□□ -0.7
CNOT4-212ENST00000541284 IRX5P78411 483 aaPredicted RBP10.7□□□□□ -0.7
CNOT4-212ENST00000541284 TXNRD1Q16881 649 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 CCDC24Q8N4L8 307 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 C7orf25Q9BPX7 421 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 ENC1O14682 589 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 USP14P54578 494 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 DDR1Q08345 913 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 CASP8Q14790 479 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 NFIXQ14938 502 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 BICDL1Q6ZP65 573 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 HDXQ7Z353 690 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 HAUS4Q9H6D7 363 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 CALCOCO1Q9P1Z2 691 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 DUSP10Q9Y6W6 482 aa10.7□□□□□ -0.7
CNOT4-212ENST00000541284 CTAGE15A4D2H0 777 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 SRGAP2O75044 1071 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 CTAGE8P0CG41 777 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 FCER1AP12319 257 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 PPP4CP60510 307 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 CTAGE6Q86UF2 777 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 CTAGE4Q8IX94 777 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 RTFDC1Q9BY42 306 aaPredicted RBP10.69□□□□□ -0.7
CNOT4-212ENST00000541284 SEMA6BQ9H3T3 888 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 EPHB6O15197 1021 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 NT5C2P49902 561 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 GALNT17Q6IS24 598 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 PRR5LQ6MZQ0 368 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 DHTKD1Q96HY7 919 aaPredicted RBP10.69□□□□□ -0.7
CNOT4-212ENST00000541284 TUBGCP2Q9BSJ2 902 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 SPZ1Q9BXG8 430 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 TRPC5Q9UL62 973 aaPredicted RBP10.69□□□□□ -0.7
CNOT4-212ENST00000541284 GUCA1BQ9UMX6 200 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 LAD1O00515 517 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 PLSCR1O15162 318 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 PRPF6O94906 941 aaKnown RBP10.69□□□□□ -0.7
CNOT4-212ENST00000541284 SYF2O95926 243 aaKnown RBP10.69□□□□□ -0.7
CNOT4-212ENST00000541284 CCNE1P24864 410 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 TUBB4BP68371 445 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 PIP4K2BP78356 416 aa10.69□□□□□ -0.7
CNOT4-212ENST00000541284 TXLNBQ8N3L3 684 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms