RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 IFNL3Q8IZI9 196 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 RSAD2Q8WXG1 361 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 P2RX5Q93086 422 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 HVCN1Q96D96 273 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 FGAP02671 866 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 IFNAR2P48551 515 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 RNF26Q9BY78 433 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 SMCO2A6NFE2 343 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 ZMYND10O75800 440 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 STMN1P16949 149 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 ZBTB21Q9ULJ3 1066 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 MRPS9P82933 396 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 FAM26FQ5R3K3 315 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 NEK8Q86SG6 692 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 CTAGE3PQ8IX95 158 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 ZNF526Q8TF50 670 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 DBN1Q16643 649 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 OGFOD1Q8N543 542 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 NEK9Q8TD19 979 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 TRIM6Q9C030 488 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 PANK4Q9NVE7 773 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 ANGPTL2Q9UKU9 493 aa16.36■□□□□ 0.21
SMARCA4-207ENST00000541122 CYP21A2P08686 494 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 SLC8A3P57103 927 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 RASA3Q14644 834 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 SAAL1Q96ER3 474 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 GIPC1O14908 333 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 KCNJ6P48051 423 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 YWHAEP62258 255 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 DHX9Q08211 1270 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 BACH1O14867 736 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 SART1O43290 800 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 ARHGAP4P98171 946 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 UBE3CQ15386 1083 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 MAP3K7O43318 606 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 MAGOHBQ96A72 148 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 TSC22D3Q99576 134 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 TNKSO95271 1327 aa16.35■□□□□ 0.21
SMARCA4-207ENST00000541122 GOLGA8QA0A0J9YX86 632 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 GOLGA8OA6NCC3 632 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 GOLGA8NF8WBI6 632 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 CHMP2AO43633 222 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 F8W031 263 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 ADCY2Q08462 1091 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 C6orf118Q5T5N4 469 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 NHEJ1Q9H9Q4 299 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 ADAM9Q13443 819 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 EXOC3L4Q17RC7 722 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 NLRP7Q8WX94 980 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 LGR6Q9HBX8 967 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 CCDC188H7C350 402 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 CYP2C19P33261 490 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 NOVA2Q9UNW9 492 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 ATP8A1Q9Y2Q0 1164 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 TTC37Q6PGP7 1564 aa16.34■□□□□ 0.21
SMARCA4-207ENST00000541122 ATP5HO75947 161 aa16.33■□□□□ 0.21
SMARCA4-207ENST00000541122 TFAP4Q01664 338 aa16.33■□□□□ 0.21
SMARCA4-207ENST00000541122 APOA5Q6Q788 366 aa16.33■□□□□ 0.21
SMARCA4-207ENST00000541122 SLFN12Q8IYM2 578 aa16.33■□□□□ 0.21
SMARCA4-207ENST00000541122 ANKRD7Q92527 254 aa16.33■□□□□ 0.21
SMARCA4-207ENST00000541122 RUBCNQ92622 972 aa16.33■□□□□ 0.21
SMARCA4-207ENST00000541122 WDR7Q9Y4E6 1490 aa16.33■□□□□ 0.21
SMARCA4-207ENST00000541122 PDE6AP16499 860 aa16.33■□□□□ 0.21
SMARCA4-207ENST00000541122 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.21
SMARCA4-207ENST00000541122 SAP30BPQ9UHR5 308 aaKnown RBP16.33■□□□□ 0.21
SMARCA4-207ENST00000541122 DNAJC8O75937 253 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 SERPINB6P35237 376 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 ANKRD20A4Q4UJ75 823 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 CCDC93Q567U6 631 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 FAM133BQ5BKY9 247 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 ANKRD20A8PQ5CZ79 823 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 ANKRD20A2Q5SQ80 823 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 ANKRD20A1Q5TYW2 823 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 PDCD7Q8N8D1 485 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 SAMSN1Q9NSI8 373 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 hCG_1642624A0A1W2PR95 340 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 PDE6CP51160 858 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 HADHQ16836 314 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 SCYL3Q8IZE3 742 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 UHMK1Q8TAS1 419 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 SLC39A2Q9NP94 309 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 SRPRBQ9Y5M8 271 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 NECTIN1Q15223 517 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 HAUS1Q96CS2 278 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 CENPKQ9BS16 269 aa16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 ZC3H12CQ9C0D7 883 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-207ENST00000541122 IFNB1P01574 187 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 TECP42680 631 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 CASC4Q6P4E1 433 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 PCDHA13Q9Y5I0 950 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 COL4A3BPQ9Y5P4 624 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms