RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 CCDC57Q2TAC2 916 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 AKNAD1Q5T1N1 836 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 L3MBTL3Q96JM7 780 aaPredicted RBP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 CCDC43Q96MW1 224 aaKnown RBP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 KDM3BQ7LBC6 1761 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 PDE2AO00408 941 aaPredicted RBP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 MAP3K13O43283 966 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 CREB3O43889 395 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 CD151P48509 253 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 FMR1Q06787 632 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 POLA2Q14181 598 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 NR1I3Q14994 352 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 INTS5Q6P9B9 1019 aaKnown RBP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 LRRC1Q9BTT6 524 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 ALDH8A1Q9H2A2 487 aaPredicted RBP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 NCOA5Q9HCD5 579 aaKnown RBP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 DDX21Q9NR30 783 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 AATFQ9NY61 560 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 MFAP3LO75121 409 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 MAP3K12Q12852 859 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 TAF11Q15544 211 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 LACTB2Q53H82 288 aaPredicted RBP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 LRP10Q7Z4F1 713 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 ZFAND2BQ8WV99 257 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 UBE2OQ9C0C9 1292 aaKnown RBP10.78□□□□□ -0.68
CLDN2-202ENST00000540876 PCDHA5Q9Y5H7 936 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 CMA1P23946 247 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 EPHB4P54760 987 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 ZRSR2Q15696 482 aaKnown RBP10.77□□□□□ -0.69
CLDN2-202ENST00000540876 SYNE3Q6ZMZ3 975 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 RINLQ6ZS11 566 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 ARMC9Q7Z3E5 817 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 AACSQ86V21 672 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 ATL2Q8NHH9 583 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 KCNV2Q8TDN2 545 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 NEK1Q96PY6 1258 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 TFR2Q9UP52 801 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 MROH7-TTC4A0A0A0MT08 1334 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 ZNF233A6NK53 670 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 ATP5J2-PTCD1G3V325 749 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 HOXB7P09629 217 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 PAX3P23760 479 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 ERVK-24P63145 666 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 G3BP1Q13283 466 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLDN2-202ENST00000540876 TXNRD1Q16881 649 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 ZNF827Q17R98 1081 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 HSP90AB4PQ58FF6 505 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 RIC3Q7Z5B4 369 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 CPLX4Q7Z7G2 160 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 CNKSR1Q969H4 720 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 MTRQ99707 1265 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 CCDC8Q9H0W5 538 aaPredicted RBP10.77□□□□□ -0.69
CLDN2-202ENST00000540876 JADE2Q9NQC1 790 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 PCMTD2Q9NV79 361 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 WWC3Q9ULE0 1092 aa10.77□□□□□ -0.69
CLDN2-202ENST00000540876 CTDNEP1O95476 244 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 FXR1P51114 621 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLDN2-202ENST00000540876 TMTC1Q8IUR5 882 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 SPICE1Q8N0Z3 855 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 KLHDC4Q8TBB5 520 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 CCT6BQ92526 530 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 C5P01031 1676 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 GNPATO15228 680 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 ZNF18P17022 549 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 BMP6P22004 513 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 ALDH3A1P30838 453 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 MYBPC3Q14896 1274 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 ANKRD20A2Q5SQ80 823 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 ANKRD20A1Q5TYW2 823 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 GKAP1Q5VSY0 366 aaPredicted RBP10.76□□□□□ -0.69
CLDN2-202ENST00000540876 ANKRD20A3Q5VUR7 823 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 IQCEQ6IPM2 695 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 EMBQ6PCB8 327 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 UBE3BQ7Z3V4 1068 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 TAX1BP1Q86VP1 789 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 FOXP4Q8IVH2 680 aaPredicted RBP10.76□□□□□ -0.69
CLDN2-202ENST00000540876 ATP6V1G3Q96LB4 118 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 LLPHQ9BRT6 129 aaKnown RBP10.76□□□□□ -0.69
CLDN2-202ENST00000540876 IQCGQ9H095 443 aaKnown RBP10.76□□□□□ -0.69
CLDN2-202ENST00000540876 WDR35Q9P2L0 1181 aa10.76□□□□□ -0.69
CLDN2-202ENST00000540876 A0A0D9SFI3 127 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 PPIP5K2O43314 1243 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 YEATS4O95619 227 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 PDHA1P08559 390 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 TUBP50607 506 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 SETDB1Q15047 1291 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 PPP4R3AQ6IN85 833 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 ILDR2Q71H61 639 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 MAATS1Q7Z4T9 603 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 SDCCAG8Q86SQ7 713 aaPredicted RBP10.75□□□□□ -0.69
CLDN2-202ENST00000540876 CNGA4Q8IV77 575 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 PROCA1Q8NCQ7 364 aaPredicted RBP10.75□□□□□ -0.69
CLDN2-202ENST00000540876 MIPOL1Q8TD10 442 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 DYDC1Q8WWB3 177 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 PRCCQ92733 491 aaPredicted RBP10.75□□□□□ -0.69
CLDN2-202ENST00000540876 EVI5LQ96CN4 794 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 PSMD14O00487 310 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 TMOD1P28289 359 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 RIPK1Q13546 671 aa10.75□□□□□ -0.69
CLDN2-202ENST00000540876 BYSLQ13895 437 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms