RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 SHCBP1Q8NEM2 672 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 CHST13Q8NET6 341 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 BICD2Q8TD16 824 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 CFHR5Q9BXR6 569 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 RNF146Q9NTX7 359 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 SAGE1Q9NXZ1 904 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 ZNF536O15090 1300 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 PLXNB2O15031 1838 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 ESYT2A0FGR8 921 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 PPP1R11O60927 126 aaPredicted RBP11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 CNMDO75829 334 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 GNA11P29992 359 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 SLC4A3P48751 1232 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 ADCY7P51828 1080 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 NLRP5P59047 1200 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 GALNT17Q6IS24 598 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 MCF2L2Q86YR7 1114 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 SAMD3Q8N6K7 520 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 SPRYD3Q8NCJ5 442 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 CUL5Q93034 780 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 COA7Q96BR5 231 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 AGBL1Q96MI9 1066 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 MAF1Q9H063 256 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 MROH8Q9H579 483 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 C6orf50Q9HD87 102 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 VPS54Q9P1Q0 977 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 BTBD7Q9P203 1132 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 RBPJLQ9UBG7 517 aa11.86□□□□□ -0.51
PPFIBP1-212ENST00000540503 MGAMO43451 1857 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 BCRP11274 1271 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 MAPK4P31152 587 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 MRPL12P52815 198 aaKnown RBP11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 FOSBP53539 338 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 NCAPG2Q86XI2 1143 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 TRERF1Q96PN7 1200 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 MOV10L1Q9BXT6 1211 aaKnown RBP11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 TXNRD2Q9NNW7 524 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 HOMER2Q9NSB8 354 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 CPA4Q9UI42 421 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 ZNF236Q9UL36 1845 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 PFASO15067 1338 aa11.85□□□□□ -0.51
PPFIBP1-212ENST00000540503 VPS37CA5D8V6 355 aaPredicted RBP11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 SMCO2A6NFE2 343 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 KRT2P35908 639 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 GNL2Q13823 731 aaKnown RBP11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 KIF22Q14807 665 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 WDR78Q5VTH9 848 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 KRT40Q6A162 431 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 MCTP2Q6DN12 878 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 C17orf99Q6UX52 265 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 DAGLBQ8NCG7 672 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 FBXO18Q8NFZ0 1043 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 AIFM3Q96NN9 605 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 ZMYND12Q9H0C1 365 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 EHMT1Q9H9B1 1298 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 RNF186Q9NXI6 227 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 MAP3K20Q9NYL2 800 aaKnown RBP11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 IVNS1ABPQ9Y6Y0 642 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 SMCHD1A6NHR9 2005 aa11.84□□□□□ -0.51
PPFIBP1-212ENST00000540503 GCOM1H8Y6P7 765 aaPredicted RBP11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 DTNBO60941 627 aa11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 TRPA1O75762 1119 aa11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 MMP1P03956 469 aa11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 POLR2MP0CAP2 368 aa11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 ERCC3P19447 782 aa11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 REXO1Q8N1G1 1221 aaKnown RBP11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 MMP19Q99542 508 aa11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 PHF20Q9BVI0 1012 aa11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 PSTPIP2Q9H939 334 aa11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 RIC8AQ9NPQ8 531 aa11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 PCDHA4Q9UN74 947 aa11.83□□□□□ -0.52
PPFIBP1-212ENST00000540503 PIK3CDO00329 1044 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 NFIBO00712 420 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 STX6O43752 255 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 CFBP00751 764 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 TAL1P17542 331 aaPredicted RBP11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 SYT1P21579 422 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 GUCY1B3Q02153 619 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 GHRHRQ02643 423 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 AP3B2Q13367 1082 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 KCTD2Q14681 263 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 Q3C1V9 767 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 NOM1Q5C9Z4 860 aaKnown RBP11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 TYW1BQ6NUM6 668 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 POTEEQ6S8J3 1075 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 NSMFQ6X4W1 530 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 RNF207Q6ZRF8 634 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 DIS3L2Q8IYB7 885 aaKnown RBP11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 BLIDQ8IZY5 108 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 ANKRD35Q8N283 1001 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 CLEC4DQ8WXI8 215 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 KCNJ14Q9UNX9 436 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 RIPK3Q9Y572 518 aa11.82□□□□□ -0.52
PPFIBP1-212ENST00000540503 PLXNA1Q9UIW2 1896 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms