RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 LHX8Q68G74 356 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 NSMFQ6X4W1 530 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 NFXL1Q6ZNB6 911 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 DHX32Q7L7V1 743 aaKnown RBP15.59■□□□□ 0.09
CCDC130-202ENST00000540216 SGMS1Q86VZ5 419 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 TRPV1Q8NER1 839 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 JMJD4Q9H9V9 463 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 CYP39A1Q9NYL5 469 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 ABCB11O95342 1321 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 LOC102724159A0A0B4J2E5 919 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 ZBTB5O15062 677 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 EIF5BO60841 1220 aaKnown RBP15.58■□□□□ 0.08
CCDC130-202ENST00000540216 GNAQP50148 359 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 PWP2Q15269 919 aaKnown RBP15.58■□□□□ 0.08
CCDC130-202ENST00000540216 QRICH1Q2TAL8 776 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 FBXO11Q86XK2 927 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 RGS22Q8NE09 1264 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 CTCFLQ8NI51 663 aaPredicted RBP15.58■□□□□ 0.08
CCDC130-202ENST00000540216 NUP133Q8WUM0 1156 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 CLEC4DQ8WXI8 215 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 MTMR8Q96EF0 704 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 FGD4Q96M96 766 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 RIOX1Q9H6W3 641 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 SLC12A7Q9Y666 1083 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 FRMPD3Q5JV73 1810 aa15.58■□□□□ 0.08
CCDC130-202ENST00000540216 ASB14A6NK59 587 aa15.57■□□□□ 0.08
CCDC130-202ENST00000540216 NFIBO00712 420 aa15.57■□□□□ 0.08
CCDC130-202ENST00000540216 SMARCA1P28370 1054 aa15.57■□□□□ 0.08
CCDC130-202ENST00000540216 EXOSC10Q01780 885 aaKnown RBP15.57■□□□□ 0.08
CCDC130-202ENST00000540216 CNTN2Q02246 1040 aa15.57■□□□□ 0.08
CCDC130-202ENST00000540216 ADCK5Q3MIX3 580 aa15.57■□□□□ 0.08
CCDC130-202ENST00000540216 USH1GQ495M9 461 aa15.57■□□□□ 0.08
CCDC130-202ENST00000540216 LZTS2Q9BRK4 669 aa15.57■□□□□ 0.08
CCDC130-202ENST00000540216 AMNQ9BXJ7 453 aa15.57■□□□□ 0.08
CCDC130-202ENST00000540216 GPHNQ9NQX3 736 aaPredicted RBP15.57■□□□□ 0.08
CCDC130-202ENST00000540216 ADD3Q9UEY8 706 aaKnown RBP15.57■□□□□ 0.08
CCDC130-202ENST00000540216 MRPL11Q9Y3B7 192 aaKnown RBP15.57■□□□□ 0.08
CCDC130-202ENST00000540216 SMCHD1A6NHR9 2005 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 PTPDC1A2A3K4 754 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 SOWAHBA6NEL2 793 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 SNAI1O95863 264 aaPredicted RBP15.56■□□□□ 0.08
CCDC130-202ENST00000540216 ZNF865P0CJ78 1059 aaPredicted RBP15.56■□□□□ 0.08
CCDC130-202ENST00000540216 AKR1A1P14550 325 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 TAL1P17542 331 aaPredicted RBP15.56■□□□□ 0.08
CCDC130-202ENST00000540216 PSMA5P28066 241 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 BAATQ14032 418 aaPredicted RBP15.56■□□□□ 0.08
CCDC130-202ENST00000540216 COL9A3Q14050 684 aaPredicted RBP15.56■□□□□ 0.08
CCDC130-202ENST00000540216 PRAMEF19Q5SWL8 479 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 SYNE3Q6ZMZ3 975 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 RNF207Q6ZRF8 634 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 ARMCX2Q7L311 632 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 NECAB2Q7Z6G3 386 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 MCF2L2Q86YR7 1114 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 HTATIP2Q9BUP3 242 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 SPZ1Q9BXG8 430 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 ABHD16BQ9H3Z7 469 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 VAT1LQ9HCJ6 419 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.56■□□□□ 0.08
CCDC130-202ENST00000540216 SNX14Q9Y5W7 946 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 MYH6P13533 1939 aa15.56■□□□□ 0.08
CCDC130-202ENST00000540216 RCAN1P53805 252 aa15.55■□□□□ 0.08
CCDC130-202ENST00000540216 BLOC1S2Q6QNY1 142 aa15.55■□□□□ 0.08
CCDC130-202ENST00000540216 CCDC144CPQ8IYA2 1237 aa15.55■□□□□ 0.08
CCDC130-202ENST00000540216 ARRDC4Q8NCT1 418 aa15.55■□□□□ 0.08
CCDC130-202ENST00000540216 JAKMIP1Q96N16 626 aaKnown RBP15.55■□□□□ 0.08
CCDC130-202ENST00000540216 MPHOSPH6Q99547 160 aaKnown RBP15.55■□□□□ 0.08
CCDC130-202ENST00000540216 MYL10Q9BUA6 226 aa15.55■□□□□ 0.08
CCDC130-202ENST00000540216 LRRC2Q9BYS8 371 aa15.55■□□□□ 0.08
CCDC130-202ENST00000540216 BRCA2P51587 3418 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 CYTH3O43739 400 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 RARBP10826 455 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 CALML3P27482 149 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 MNX1P50219 401 aaPredicted RBP15.54■□□□□ 0.08
CCDC130-202ENST00000540216 RPS6P62753 249 aaKnown RBP15.54■□□□□ 0.08
CCDC130-202ENST00000540216 ACVR2BQ13705 512 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 SLC35G1Q2M3R5 365 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 APOA5Q6Q788 366 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 SLC30A10Q6XR72 485 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 SAMD3Q8N6K7 520 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 DNERQ8NFT8 737 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 MORC4Q8TE76 937 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 PAWRQ96IZ0 340 aaKnown RBP15.54■□□□□ 0.08
CCDC130-202ENST00000540216 USP26Q9BXU7 913 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 ZHX1Q9UKY1 873 aaPredicted RBP15.54■□□□□ 0.08
CCDC130-202ENST00000540216 FAM184BQ9ULE4 1060 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 LCTP09848 1927 aa15.54■□□□□ 0.08
CCDC130-202ENST00000540216 TNRC18O15417 2968 aaPredicted RBP15.54■□□□□ 0.08
CCDC130-202ENST00000540216 MCM3APO60318 1980 aa15.53■□□□□ 0.08
CCDC130-202ENST00000540216 ASTN1O14525 1302 aa15.53■□□□□ 0.08
CCDC130-202ENST00000540216 PNMA6FA0A0J9YX94 578 aa15.53■□□□□ 0.08
CCDC130-202ENST00000540216 B4DLN1 442 aa15.53■□□□□ 0.08
CCDC130-202ENST00000540216 DNM1LO00429 736 aa15.53■□□□□ 0.08
CCDC130-202ENST00000540216 ALDH5A1P51649 535 aaPredicted RBP15.53■□□□□ 0.08
CCDC130-202ENST00000540216 MRPL12P52815 198 aaKnown RBP15.53■□□□□ 0.08
CCDC130-202ENST00000540216 FGD1P98174 961 aa15.53■□□□□ 0.08
CCDC130-202ENST00000540216 HOMER1Q86YM7 354 aa15.53■□□□□ 0.08
CCDC130-202ENST00000540216 FBXL16Q8N461 479 aa15.53■□□□□ 0.08
CCDC130-202ENST00000540216 FANCBQ8NB91 859 aa15.53■□□□□ 0.08
CCDC130-202ENST00000540216 DIS3LQ8TF46 1054 aaKnown RBP15.53■□□□□ 0.08
CCDC130-202ENST00000540216 RRP36Q96EU6 259 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms