RNA–Protein interactions for RNA: ENST00000540162.5

MRPL48-209, Transcript of mitochondrial ribosomal protein L48, human

TSL 5

Gene MRPL48, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL48-209	ENST00000540162	TSPY8	P0CW00	308 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	FDX1	P10109	184 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	MYOG	P15173	224 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	SNAP25	P60880	206 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	PSMC6	P62333	389 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	TFAP4	Q01664	338 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	TSHZ3	Q63HK5	1081 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	TLK2	Q86UE8	772 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	IFNL3	Q8IZI9	196 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	NEDD1	Q8NHV4	660 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	TRERF1	Q96PN7	1200 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	UHRF1	Q96T88	793 aa	Predicted RBP	13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	NOC4L	Q9BVI4	516 aa	Known RBP	13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	MTIF3	Q9H2K0	278 aa	Known RBP	13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	RNF146	Q9NTX7	359 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	SYNPO2	Q9UMS6	1093 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	ZNF536	O15090	1300 aa		13.78	□□□□□ -0.2
MRPL48-209	ENST00000540162	B4GALT4	O60513	344 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	ALAS1	P13196	640 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	GNAT2	P19087	354 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	MCC	P23508	829 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	IK	Q13123	557 aa	Predicted RBP	13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	IQSEC1	Q6DN90	963 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	TAPT1	Q6NXT6	567 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	EEPD1	Q7L9B9	569 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	RPUSD2	Q8IZ73	545 aa	Known RBP	13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	MIER1	Q8N108	512 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	CHURC1	Q8WUH1	139 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	STAG1	Q8WVM7	1258 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	WNT8A	Q9H1J5	351 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	CHMP4B	Q9H444	224 aa	Known RBP	13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	SLC4A7	Q9Y6M7	1214 aa		13.77	□□□□□ -0.21
MRPL48-209	ENST00000540162	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	COL11A1	P12107	1806 aa	Predicted RBP	13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	PARP14	Q460N5	1801 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	ZEB2	O60315	1214 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	SLC1A4	P43007	532 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	STAT2	P52630	851 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	TKFC	Q3LXA3	575 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	MUM1L1	Q5H9M0	696 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	KCTD1	Q719H9	257 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	FAM160B2	Q86V87	743 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	IL27	Q8NEV9	243 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	VWCE	Q96DN2	955 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	SCLY	Q96I15	445 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	GMCL1	Q96IK5	515 aa		13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	PURB	Q96QR8	312 aa	Known RBP	13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.76	□□□□□ -0.21
MRPL48-209	ENST00000540162	ZBBX	A8MT70	800 aa		13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	ZFY	P08048	801 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	PDE4B	Q07343	736 aa		13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	PPP2R2D	Q66LE6	453 aa		13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	KIAA1211	Q6ZU35	1233 aa		13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	FBXO16	Q8IX29	292 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	MICALL1	Q8N3F8	863 aa		13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	NECAB3	Q96P71	396 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	SEC62	Q99442	399 aa	Known RBP	13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	SEZ6L	Q9BYH1	1024 aa		13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	NACAP1	Q9BZK3	213 aa		13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	CYP39A1	Q9NYL5	469 aa		13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162		Q9Y3F1	56 aa		13.75	□□□□□ -0.21
MRPL48-209	ENST00000540162	RFXAP	O00287	272 aa		13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	SLC3A2	P08195	630 aa	Known RBP	13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	TTLL4	Q14679	1199 aa		13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	C20orf194	Q5TEA3	1177 aa		13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	RCSD1	Q6JBY9	416 aa		13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	NSMF	Q6X4W1	530 aa		13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	GPATCH3	Q96I76	525 aa		13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	INCENP	Q9NQS7	918 aa		13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	PRR12	Q9ULL5	1215 aa		13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	PCDHA11	Q9Y5I1	949 aa		13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	PLXNA1	Q9UIW2	1896 aa		13.74	□□□□□ -0.21
MRPL48-209	ENST00000540162	NMT2	O60551	498 aa		13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	PLA2G6	O60733	806 aa		13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	CYP2C9	P11712	490 aa		13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	BMP1	P13497	986 aa		13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	ATP2A2	P16615	1042 aa	Known RBP	13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	TFF2	Q03403	129 aa		13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	PPARA	Q07869	468 aa		13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	NAPB	Q9H115	298 aa		13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	IL17RB	Q9NRM6	502 aa		13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	TRMT13	Q9NUP7	481 aa	Known RBP	13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	STX8	Q9UNK0	236 aa		13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	MTMR7	Q9Y216	660 aa		13.73	□□□□□ -0.21
MRPL48-209	ENST00000540162	PLIN4	Q96Q06	1357 aa		13.72	□□□□□ -0.21
MRPL48-209	ENST00000540162	SKIV2L	Q15477	1246 aa	Known RBP	13.72	□□□□□ -0.21
MRPL48-209	ENST00000540162	RASGRP2	Q7LDG7	609 aa		13.72	□□□□□ -0.21
MRPL48-209	ENST00000540162	DEFB128	Q7Z7B8	93 aa		13.72	□□□□□ -0.21
MRPL48-209	ENST00000540162	MORC4	Q8TE76	937 aa		13.72	□□□□□ -0.21
MRPL48-209	ENST00000540162	WDR11	Q9BZH6	1224 aa		13.72	□□□□□ -0.21
MRPL48-209	ENST00000540162	DCTPP1	Q9H773	170 aa		13.72	□□□□□ -0.21
MRPL48-209	ENST00000540162	CERS4	Q9HA82	394 aa		13.72	□□□□□ -0.21
MRPL48-209	ENST00000540162	VTA1	Q9NP79	307 aa		13.72	□□□□□ -0.21
MRPL48-209	ENST00000540162	CCPG1	Q9ULG6	757 aa		13.72	□□□□□ -0.21
MRPL48-209	ENST00000540162	GREB1L	Q9C091	1923 aa	Predicted RBP	13.71	□□□□□ -0.21
MRPL48-209	ENST00000540162	MYL3	P08590	195 aa		13.71	□□□□□ -0.21
MRPL48-209	ENST00000540162	SUPT20HL2	P0C7V6	817 aa		13.71	□□□□□ -0.21
MRPL48-209	ENST00000540162	KCNQ1	P51787	676 aa		13.71	□□□□□ -0.21

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