RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MIIPQ5JXC2 388 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 ANKRD18AQ8IVF6 992 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 SPATA4Q8NEY3 305 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 CNOT6LQ96LI5 555 aaKnown RBP15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 THAP9Q9H5L6 903 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 ZNHIT6Q9NWK9 470 aaKnown RBP15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 ZSCAN5CA6NGD5 496 aaPredicted RBP15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 PSMA7O14818 248 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 ERLIN2O94905 339 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 GUCY2CP25092 1073 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 DNA2P51530 1060 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 CHRNDQ07001 517 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 PDCLQ13371 301 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 PPP2R5BQ15173 497 aa15.54■□□□□ 0.08
SCNN1A-215ENST00000540037 NUTM2BA6NNL0 878 aaPredicted RBP15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 NUTM2EB1AL46 878 aaPredicted RBP15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 KRT14P02533 472 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 VAV2P52735 878 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 MS4A14Q96JA4 679 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 RPGRIP1Q96KN7 1286 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 CCDC42Q96M95 316 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 FAM207AQ9NSI2 230 aaPredicted RBP15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 ARHGAP20Q9P2F6 1191 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 DUOX1Q9NRD9 1551 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 EBAG9O00559 213 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 LONP1P36776 959 aaKnown RBP15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 MTIF2P46199 727 aaKnown RBP15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 ZBED6P86452 979 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 PPFIA1Q13136 1202 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 PFKFB3Q16875 520 aaPredicted RBP15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 INF2Q27J81 1249 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 CCDC178Q5BJE1 867 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 C2CD5Q86YS7 1000 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 STAG2Q8N3U4 1231 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 GIMAP8Q8ND71 665 aaPredicted RBP15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 EHBP1Q8NDI1 1231 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 NOC4LQ9BVI4 516 aaKnown RBP15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 COL4A1P02462 1669 aa15.53■□□□□ 0.08
SCNN1A-215ENST00000540037 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.52■□□□□ 0.08
SCNN1A-215ENST00000540037 ESYT3A0FGR9 886 aa15.52■□□□□ 0.08
SCNN1A-215ENST00000540037 EIF3HO15372 352 aaKnown RBP eCLIP15.52■□□□□ 0.08
SCNN1A-215ENST00000540037 CPP00450 1065 aa15.52■□□□□ 0.08
SCNN1A-215ENST00000540037 IFIH1Q9BYX4 1025 aaKnown RBP15.52■□□□□ 0.08
SCNN1A-215ENST00000540037 COL5A2P05997 1499 aaPredicted RBP15.52■□□□□ 0.08
SCNN1A-215ENST00000540037 SHANK3Q9BYB0 1731 aa15.52■□□□□ 0.08
SCNN1A-215ENST00000540037 ANO9A1A5B4 782 aa15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 DTHD1Q6ZMT9 781 aa15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 ZNF34Q8IZ26 560 aa15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 BLIDQ8IZY5 108 aa15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 OSBPL9Q96SU4 736 aa15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 COL1A1P02452 1464 aaPredicted RBP15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 RHOBTB3O94955 611 aa15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 UBA7P41226 1012 aa15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 HAUS3Q68CZ6 603 aa15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 TMC4Q7Z404 712 aa15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 PCDHA13Q9Y5I0 950 aa15.52■□□□□ 0.07
SCNN1A-215ENST00000540037 CICQ96RK0 1608 aaPredicted RBP15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 NUP98P52948 1817 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 PDE4DQ08499 809 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 KCNV1Q6PIU1 500 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 MMGT1Q8N4V1 131 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 SH2D4AQ9H788 454 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 RBM12Q9NTZ6 932 aaKnown RBP15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 ZNF142P52746 1687 aaPredicted RBP15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 BUB1O43683 1085 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 DDAH1O94760 285 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 FAM153BP0C7A2 387 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 EIF4A3P38919 411 aaKnown RBP15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 TRAPPC10P48553 1259 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 EVA1CP58658 441 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 SPA17Q15506 151 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 FAM153CQ494X1 144 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 MMS22LQ6ZRQ5 1243 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 ZNF662Q6ZS27 426 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 CCDC170Q8IYT3 715 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 SH3GL2Q99962 352 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 CARD10Q9BWT7 1032 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 KBTBD4Q9NVX7 518 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 FAM153AQ9UHL3 310 aa15.51■□□□□ 0.07
SCNN1A-215ENST00000540037 PLCH1Q4KWH8 1693 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 LOC102724159A0A0B4J2E5 919 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 ZEB2O60315 1214 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 PLCG1P19174 1290 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 APBA1Q02410 837 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 PWP2Q15269 919 aaKnown RBP15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 ARL6IP4Q66PJ3 421 aaKnown RBP15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 AMOTL1Q8IY63 956 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 CCDC155Q8N6L0 562 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 P2RX5Q93086 422 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 ARAP2Q8WZ64 1704 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 CALM1P0DP23 149 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 CALM2P0DP24 149 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 CALM3P0DP25 149 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 KIF11P52732 1056 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 KCNB1Q14721 858 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 TRADDQ15628 312 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 ZIM3Q96PE6 472 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 CPVLQ9H3G5 476 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 DEF6Q9H4E7 631 aa15.5■□□□□ 0.07
SCNN1A-215ENST00000540037 JAG2Q9Y219 1238 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms