RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 OR52Z1P0C646 297 aa25.46■■□□□ 1.67
HOMER3-204ENST00000539827 PAGE5Q96GU1 130 aa25.46■■□□□ 1.67
HOMER3-204ENST00000539827 MAN1B1Q9UKM7 699 aa25.46■■□□□ 1.67
HOMER3-204ENST00000539827 PP2D1A8MPX8 630 aa25.45■■□□□ 1.67
HOMER3-204ENST00000539827 TAL1P17542 331 aaPredicted RBP25.45■■□□□ 1.67
HOMER3-204ENST00000539827 SMARCE1Q969G3 411 aa25.45■■□□□ 1.67
HOMER3-204ENST00000539827 RTN4Q9NQC3 1192 aaKnown RBP25.45■■□□□ 1.67
HOMER3-204ENST00000539827 CCDC39Q9UFE4 941 aa25.45■■□□□ 1.67
HOMER3-204ENST00000539827 PRR12Q9ULL5 1215 aa25.45■■□□□ 1.67
HOMER3-204ENST00000539827 PHF20L1A8MW92 1017 aa25.45■■□□□ 1.66
HOMER3-204ENST00000539827 PRPHP41219 470 aa25.45■■□□□ 1.66
HOMER3-204ENST00000539827 FBXO11Q86XK2 927 aa25.45■■□□□ 1.66
HOMER3-204ENST00000539827 BPIFA3Q9BQP9 254 aa25.45■■□□□ 1.66
HOMER3-204ENST00000539827 AMNQ9BXJ7 453 aa25.45■■□□□ 1.66
HOMER3-204ENST00000539827 FHDC1Q9C0D6 1143 aaPredicted RBP25.45■■□□□ 1.66
HOMER3-204ENST00000539827 USP17L15C9J2P7 530 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 USP17L13C9JLJ4 530 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 USP17L11C9JVI0 530 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 USP17L18D6R9N7 530 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 USP17L22D6RA61 530 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 USP17L17D6RBQ6 530 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 USP17L19D6RCP7 530 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 USP17L20D6RJB6 530 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 H7C1D1 291 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 USP17L24Q0WX57 530 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 E2F4Q16254 413 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 USH1GQ495M9 461 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 USP17L6PQ6QN14 398 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 SH3RF1Q7Z6J0 888 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 POTEDQ86YR6 584 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 TRIM5Q9C035 493 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 VCPKMTQ9H867 229 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 RRAGDQ9NQL2 400 aaPredicted RBP25.44■■□□□ 1.66
HOMER3-204ENST00000539827 TDP2O95551 362 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 CASP1P29466 404 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 SARSP49591 514 aaKnown RBP25.44■■□□□ 1.66
HOMER3-204ENST00000539827 HS1BP3Q53T59 392 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 IQUBQ8NA54 791 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 STAMQ92783 540 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 DEFB129Q9H1M3 183 aa25.44■■□□□ 1.66
HOMER3-204ENST00000539827 ASNSP08243 561 aa25.43■■□□□ 1.66
HOMER3-204ENST00000539827 TXLNAP40222 546 aa25.43■■□□□ 1.66
HOMER3-204ENST00000539827 KARSQ15046 597 aaKnown RBP25.43■■□□□ 1.66
HOMER3-204ENST00000539827 CCDC34Q96HJ3 373 aa25.43■■□□□ 1.66
HOMER3-204ENST00000539827 ESPNB1AK53 854 aa25.42■■□□□ 1.66
HOMER3-204ENST00000539827 BMP6P22004 513 aa25.42■■□□□ 1.66
HOMER3-204ENST00000539827 ZNF75DP51815 510 aa25.42■■□□□ 1.66
HOMER3-204ENST00000539827 STAT2P52630 851 aa25.42■■□□□ 1.66
HOMER3-204ENST00000539827 SLC37A4O43826 429 aa25.42■■□□□ 1.66
HOMER3-204ENST00000539827 LMNB1P20700 586 aa25.42■■□□□ 1.66
HOMER3-204ENST00000539827 ORC2Q13416 577 aaPredicted RBP25.42■■□□□ 1.66
HOMER3-204ENST00000539827 NBPF12Q5TAG4 269 aaPredicted RBP25.42■■□□□ 1.66
HOMER3-204ENST00000539827 NT5DC1Q5TFE4 455 aa25.42■■□□□ 1.66
HOMER3-204ENST00000539827 TRPM4Q8TD43 1214 aa25.42■■□□□ 1.66
HOMER3-204ENST00000539827 SH2D4AQ9H788 454 aa25.42■■□□□ 1.66
HOMER3-204ENST00000539827 ATAD5Q96QE3 1844 aa25.41■■□□□ 1.66
HOMER3-204ENST00000539827 PDXDC2PQ6P474 469 aa25.41■■□□□ 1.66
HOMER3-204ENST00000539827 SPC24Q8NBT2 197 aa25.41■■□□□ 1.66
HOMER3-204ENST00000539827 GLT8D2Q9H1C3 349 aa25.41■■□□□ 1.66
HOMER3-204ENST00000539827 CALCRLQ16602 461 aa25.4■■□□□ 1.66
HOMER3-204ENST00000539827 ANGEL2Q5VTE6 544 aaKnown RBP25.4■■□□□ 1.66
HOMER3-204ENST00000539827 SAMD1Q6SPF0 538 aaPredicted RBP25.4■■□□□ 1.66
HOMER3-204ENST00000539827 PLA2G4DQ86XP0 818 aa25.4■■□□□ 1.66
HOMER3-204ENST00000539827 PYM1Q9BRP8 204 aaKnown RBP25.4■■□□□ 1.66
HOMER3-204ENST00000539827 ZNF341Q9BYN7 854 aa25.4■■□□□ 1.66
HOMER3-204ENST00000539827 SMC2O95347 1197 aa25.4■■□□□ 1.66
HOMER3-204ENST00000539827 UBA7P41226 1012 aa25.4■■□□□ 1.66
HOMER3-204ENST00000539827 TECP42680 631 aa25.4■■□□□ 1.66
HOMER3-204ENST00000539827 MORC3Q14149 939 aa25.4■■□□□ 1.66
HOMER3-204ENST00000539827 KIFC2Q96AC6 838 aa25.4■■□□□ 1.66
HOMER3-204ENST00000539827 PLIN2Q99541 437 aa25.4■■□□□ 1.66
HOMER3-204ENST00000539827 SMTNL1A8MU46 457 aa25.39■■□□□ 1.66
HOMER3-204ENST00000539827 STAT6P42226 847 aa25.39■■□□□ 1.66
HOMER3-204ENST00000539827 TXKP42681 527 aa25.39■■□□□ 1.66
HOMER3-204ENST00000539827 NCAPHQ15003 741 aa25.39■■□□□ 1.66
HOMER3-204ENST00000539827 PRAMEF18Q5VWM3 479 aa25.39■■□□□ 1.66
HOMER3-204ENST00000539827 RASSF8Q8NHQ8 419 aa25.39■■□□□ 1.66
HOMER3-204ENST00000539827 SPATA20Q8TB22 786 aa25.39■■□□□ 1.66
HOMER3-204ENST00000539827 MTMR9Q96QG7 549 aa25.39■■□□□ 1.66
HOMER3-204ENST00000539827 FEZ1Q99689 392 aa25.39■■□□□ 1.66
HOMER3-204ENST00000539827 GPRC5DQ9NZD1 345 aa25.39■■□□□ 1.66
HOMER3-204ENST00000539827 MEIS2O14770 477 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 DPYDQ12882 1025 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 CCDC174Q6PII3 467 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 CHURC1Q8WUH1 139 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 ANO3Q9BYT9 981 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 CCSER1Q9C0I3 900 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 BLZF1Q9H2G9 400 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 DISC1Q9NRI5 854 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 MYH7BA7E2Y1 1941 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 RRAGBQ5VZM2 374 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 SARM1Q6SZW1 724 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 ZSCAN30Q86W11 494 aa25.38■■□□□ 1.65
HOMER3-204ENST00000539827 DICER1Q9UPY3 1922 aaKnown RBP25.37■■□□□ 1.65
HOMER3-204ENST00000539827 EPS15P42566 896 aa25.37■■□□□ 1.65
HOMER3-204ENST00000539827 CABP7Q86V35 215 aa25.37■■□□□ 1.65
HOMER3-204ENST00000539827 GPC2Q8N158 579 aa25.37■■□□□ 1.65
HOMER3-204ENST00000539827 P2RX7Q99572 595 aaKnown RBP25.37■■□□□ 1.65
HOMER3-204ENST00000539827 MTRQ99707 1265 aa25.37■■□□□ 1.65
HOMER3-204ENST00000539827 INPP5BP32019 993 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms