RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 CMTR1Q8N1G2 835 aaKnown RBP12.51□□□□□ -0.41
HMGA2-209ENST00000539662 NUP133Q8WUM0 1156 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 LENG1Q96BZ8 264 aaPredicted RBP12.51□□□□□ -0.41
HMGA2-209ENST00000539662 NEK1Q96PY6 1258 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 TINF2Q9BSI4 451 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 ALPK3Q96L96 1907 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 ERICH2A1L162 156 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 PTGS1P23219 599 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 CNGA1P29973 690 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 NSMFQ6X4W1 530 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 SLC30A10Q6XR72 485 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 FAM133AQ8N9E0 248 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 USP26Q9BXU7 913 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 CYP39A1Q9NYL5 469 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 FBXO40Q9UH90 709 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 BRPF3Q9ULD4 1205 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 DIS3Q9Y2L1 958 aaKnown RBP12.5□□□□□ -0.41
HMGA2-209ENST00000539662 PDE4DIPQ5VU43 2346 aa12.5□□□□□ -0.41
HMGA2-209ENST00000539662 LRRC37A2A6NM11 1700 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 ADCY6O43306 1168 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
HMGA2-209ENST00000539662 PLEKHA8P1O95397 391 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 SEC24BO95487 1268 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 ZNF865P0CJ78 1059 aaPredicted RBP12.49□□□□□ -0.41
HMGA2-209ENST00000539662 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
HMGA2-209ENST00000539662 BAATQ14032 418 aaPredicted RBP12.49□□□□□ -0.41
HMGA2-209ENST00000539662 TKFCQ3LXA3 575 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 TMEM63BQ5T3F8 832 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 RNF20Q5VTR2 975 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 PIBF1Q8WXW3 757 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 MTMR8Q96EF0 704 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 PAWRQ96IZ0 340 aaKnown RBP12.49□□□□□ -0.41
HMGA2-209ENST00000539662 JAKMIP1Q96N16 626 aaKnown RBP12.49□□□□□ -0.41
HMGA2-209ENST00000539662 PIGSQ96S52 555 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 OGDHLQ9ULD0 1010 aa12.49□□□□□ -0.41
HMGA2-209ENST00000539662 POTEB2H3BUK9 544 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 OPLAHO14841 1288 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 FARP2O94887 1054 aaPredicted RBP12.48□□□□□ -0.41
HMGA2-209ENST00000539662 SART3Q15020 963 aaKnown RBP12.48□□□□□ -0.41
HMGA2-209ENST00000539662 MAMDC4Q6UXC1 1216 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 NFXL1Q6ZNB6 911 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 DHX32Q7L7V1 743 aaKnown RBP12.48□□□□□ -0.41
HMGA2-209ENST00000539662 CATIPQ7Z7H3 387 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 HOMER1Q86YM7 354 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 TMEM87BQ96K49 555 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 KATNBL1Q9H079 304 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 RIOX1Q9H6W3 641 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 SLC5A4Q9NY91 659 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 COL20A1Q9P218 1284 aa12.48□□□□□ -0.41
HMGA2-209ENST00000539662 DDX20Q9UHI6 824 aaKnown RBP12.48□□□□□ -0.41
HMGA2-209ENST00000539662 WDR19Q8NEZ3 1342 aa12.47□□□□□ -0.41
HMGA2-209ENST00000539662 hCG_1642624A0A1W2PR95 340 aa12.47□□□□□ -0.41
HMGA2-209ENST00000539662 PTPDC1A2A3K4 754 aa12.47□□□□□ -0.41
HMGA2-209ENST00000539662 CALML3P27482 149 aa12.47□□□□□ -0.41
HMGA2-209ENST00000539662 LIFRP42702 1097 aa12.47□□□□□ -0.41
HMGA2-209ENST00000539662 ARMCX2Q7L311 632 aa12.47□□□□□ -0.41
HMGA2-209ENST00000539662 SRBD1Q8N5C6 995 aaKnown RBP12.47□□□□□ -0.41
HMGA2-209ENST00000539662 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.47□□□□□ -0.41
HMGA2-209ENST00000539662 PFASO15067 1338 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.46□□□□□ -0.41
HMGA2-209ENST00000539662 CCDC69A6NI79 296 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 ZBTB5O15062 677 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 SEPT4O43236 478 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 DDAH1O94760 285 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 REC8O95072 547 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 RPS6P62753 249 aaKnown RBP12.46□□□□□ -0.41
HMGA2-209ENST00000539662 GJC2Q5T442 439 aaPredicted RBP12.46□□□□□ -0.41
HMGA2-209ENST00000539662 RNF207Q6ZRF8 634 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 Q6ZUG5 572 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 EEPD1Q7L9B9 569 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 ZNF467Q7Z7K2 595 aaPredicted RBP12.46□□□□□ -0.41
HMGA2-209ENST00000539662 SGMS1Q86VZ5 419 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 MICU3Q86XE3 530 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 FBXO11Q86XK2 927 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 CCDC82Q8N4S0 544 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 MTA3Q9BTC8 594 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 ZHX1Q9UKY1 873 aaPredicted RBP12.46□□□□□ -0.41
HMGA2-209ENST00000539662 DNAH12Q6ZR08 3092 aa12.46□□□□□ -0.41
HMGA2-209ENST00000539662 SYNGAP1Q96PV0 1343 aa12.45□□□□□ -0.42
HMGA2-209ENST00000539662 APOBRQ0VD83 1088 aa12.45□□□□□ -0.42
HMGA2-209ENST00000539662 ACVR2BQ13705 512 aa12.45□□□□□ -0.42
HMGA2-209ENST00000539662 APOA5Q6Q788 366 aa12.45□□□□□ -0.42
HMGA2-209ENST00000539662 TAAR1Q96RJ0 339 aa12.45□□□□□ -0.42
HMGA2-209ENST00000539662 LARP6Q9BRS8 491 aaKnown RBP12.45□□□□□ -0.42
HMGA2-209ENST00000539662 FAM217BQ9NTX9 383 aaPredicted RBP12.45□□□□□ -0.42
HMGA2-209ENST00000539662 SLC12A7Q9Y666 1083 aa12.45□□□□□ -0.42
HMGA2-209ENST00000539662 ABCB11O95342 1321 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 MYADML2A6NDP7 307 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 PGK1P00558 417 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
HMGA2-209ENST00000539662 COL6A1P12109 1028 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 CASTP20810 708 aaKnown RBP12.44□□□□□ -0.42
HMGA2-209ENST00000539662 RPS6KB1P23443 525 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 CDC27P30260 824 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 ALDH5A1P51649 535 aaPredicted RBP12.44□□□□□ -0.42
HMGA2-209ENST00000539662 KRT32Q14532 448 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms