RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 TRIM50Q86XT4 487 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 TSC1Q92574 1164 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 RILPQ96NA2 401 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 MAGI2Q86UL8 1455 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 HMGB1P1B2RPK0 211 aaPredicted RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 TTLL1O95922 423 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 MYL1P05976 194 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 ALAS1P13196 640 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 MAN1A1P33908 653 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 LRRC47Q8N1G4 583 aaKnown RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 AFG3L2Q9Y4W6 797 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 FMNL1O95466 1100 aaPredicted RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 GCFC2P16383 781 aaKnown RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 SATB1Q01826 763 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 POMGNT1Q8WZA1 660 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 EAF2Q96CJ1 260 aaPredicted RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 CABS1Q96KC9 395 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 MTMR6Q9Y217 621 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 ANKARQ7Z5J8 1434 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 A0A1B0GUA9 196 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 OATP04181 439 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 PDIA3P30101 505 aaKnown RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 PIK3CAP42336 1068 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 PPP2R5DQ14738 602 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 SPATS2Q86XZ4 545 aaKnown RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 RPUSD2Q8IZ73 545 aaKnown RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 STAMQ92783 540 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 CCPG1Q9ULG6 757 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 PPEF1O14829 653 aaPredicted RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 BUB1BO60566 1050 aaPredicted RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 PPP2R5AQ15172 486 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 ZMYM1Q5SVZ6 1142 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 ANKRD20A3Q5VUR7 823 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 NLGN1Q8N2Q7 840 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 HOMER3Q9NSC5 361 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 TMEM63CQ9P1W3 806 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 IQGAP3Q86VI3 1631 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 LOC102724428A0A0B4J2F2 783 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 PPFIA4O75335 1185 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 SIK1P57059 783 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 ICA1Q05084 483 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 KRT71Q3SY84 523 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 SLFN13Q68D06 897 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 ANKRD35Q8N283 1001 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 TRIM11Q96F44 468 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 USP28Q96RU2 1077 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 OSBPL3Q9H4L5 887 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 U2AF2P26368 475 aaKnown RBP eCLIP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 GARSP41250 739 aaKnown RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 TFDP1Q14186 410 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 RPS6KA2Q15349 733 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 CCDC24Q8N4L8 307 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 EDC3Q96F86 508 aaKnown RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 PLEKHF1Q96S99 279 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 HESX1Q9UBX0 185 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 DDX41Q9UJV9 622 aaKnown RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 PCDHA4Q9UN74 947 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 GOLGA8QA0A0J9YX86 632 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 GOLGA8OA6NCC3 632 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 GOLGA8NF8WBI6 632 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 hCG_1984214I3L0E3 225 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 TLR3O15455 904 aaKnown RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 ZBTB24O43167 697 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 RNF8O76064 485 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 NDUFA8P51970 172 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 SCRN1Q12765 414 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 SEPT6Q14141 434 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 SEPT2Q15019 361 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 ZNF713Q8N859 430 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 FAM193BQ96PV7 902 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 EFCAB8A8MWE9 144 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 CASQ2O14958 399 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 OSBPP22059 807 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 C10orf76Q5T2E6 689 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 RNF10Q8N5U6 811 aaKnown RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 DHTKD1Q96HY7 919 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 PSMB7Q99436 277 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 GREM2Q9H772 168 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 PRDM15P57071 1507 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 GOLGA8CPA6NN73 597 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 KIF3CO14782 793 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 ADD1P35611 737 aaKnown RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 SULF1Q8IWU6 871 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 CCDC13Q8IYE1 715 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 ANKRD36BP1Q96IX9 119 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 AMNQ9BXJ7 453 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 HAUS4Q9H6D7 363 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 CDK12Q9NYV4 1490 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-207ENST00000539563 TCP10L2B9ZVM9 353 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 LRMPQ12912 555 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 ARHGEF6Q15052 776 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 EXOC3L4Q17RC7 722 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 DOK7Q18PE1 504 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 RETREG2Q8NC44 543 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 MMS19Q96T76 1030 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 SPZ1Q9BXG8 430 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 VPS37BQ9H9H4 285 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 TTLL3Q9Y4R7 772 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 CARMIL3Q8ND23 1372 aa7.1□□□□□ -1.27
LSAMP-207ENST00000539563 BBOX1O75936 387 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms