RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZSWIM5Q9P217 1185 aa22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 ASB14A6NK59 587 aa22.37■■□□□ 1.17
TNFRSF1A-212ENST00000539372 NFIBO00712 420 aa22.37■■□□□ 1.17
TNFRSF1A-212ENST00000539372 TDHQ8IZJ6 230 aa22.37■■□□□ 1.17
TNFRSF1A-212ENST00000539372 KLHDC9Q8NEP7 349 aa22.37■■□□□ 1.17
TNFRSF1A-212ENST00000539372 CPVLQ9H3G5 476 aa22.37■■□□□ 1.17
TNFRSF1A-212ENST00000539372 KAT14Q9H8E8 782 aa22.37■■□□□ 1.17
TNFRSF1A-212ENST00000539372 LAMA3Q16787 3333 aa22.36■■□□□ 1.17
TNFRSF1A-212ENST00000539372 C6orf222P0C671 652 aaPredicted RBP22.36■■□□□ 1.17
TNFRSF1A-212ENST00000539372 CHMLP26374 656 aa22.36■■□□□ 1.17
TNFRSF1A-212ENST00000539372 KCNA10Q16322 511 aa22.36■■□□□ 1.17
TNFRSF1A-212ENST00000539372 CCDC178Q5BJE1 867 aa22.36■■□□□ 1.17
TNFRSF1A-212ENST00000539372 ENAHQ8N8S7 591 aaPredicted RBP22.36■■□□□ 1.17
TNFRSF1A-212ENST00000539372 PNMA1Q8ND90 353 aa22.36■■□□□ 1.17
TNFRSF1A-212ENST00000539372 TSEN34Q9BSV6 310 aaKnown RBP22.36■■□□□ 1.17
TNFRSF1A-212ENST00000539372 KRT23Q9C075 422 aa22.36■■□□□ 1.17
TNFRSF1A-212ENST00000539372 UBA5Q9GZZ9 404 aa22.36■■□□□ 1.17
TNFRSF1A-212ENST00000539372 TNKSO95271 1327 aa22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 RAD50Q92878 1312 aa22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 NT5C2P49902 561 aa22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 ACLYP53396 1101 aa22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 TLE2Q04725 743 aa22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 BAATQ14032 418 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 C1orf53Q5VUE5 145 aa22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 NOL8Q76FK4 1167 aaKnown RBP22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 EEPD1Q7L9B9 569 aa22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 SH3RF1Q7Z6J0 888 aa22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 RUFY2Q8WXA3 655 aa22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 ANKS1AQ92625 1134 aa22.35■■□□□ 1.17
TNFRSF1A-212ENST00000539372 PTPDC1A2A3K4 754 aa22.34■■□□□ 1.17
TNFRSF1A-212ENST00000539372 PTH1RQ03431 593 aa22.34■■□□□ 1.17
TNFRSF1A-212ENST00000539372 GPATCH4Q5T3I0 446 aaKnown RBP22.34■■□□□ 1.17
TNFRSF1A-212ENST00000539372 CCSAPQ6IQ19 270 aaPredicted RBP22.34■■□□□ 1.17
TNFRSF1A-212ENST00000539372 CLEC4DQ8WXI8 215 aa22.34■■□□□ 1.17
TNFRSF1A-212ENST00000539372 UBAC1Q9BSL1 405 aa22.34■■□□□ 1.17
TNFRSF1A-212ENST00000539372 CNNM2Q9H8M5 875 aa22.34■■□□□ 1.17
TNFRSF1A-212ENST00000539372 SPC25Q9HBM1 224 aa22.34■■□□□ 1.17
TNFRSF1A-212ENST00000539372 STARD7Q9NQZ5 370 aa22.34■■□□□ 1.17
TNFRSF1A-212ENST00000539372 PDLIM7Q9NR12 457 aa22.34■■□□□ 1.17
TNFRSF1A-212ENST00000539372 MOXD2PA6NHM9 499 aa22.33■■□□□ 1.17
TNFRSF1A-212ENST00000539372 PQBP1O60828 265 aaKnown RBP22.33■■□□□ 1.17
TNFRSF1A-212ENST00000539372 PTGS1P23219 599 aa22.33■■□□□ 1.17
TNFRSF1A-212ENST00000539372 GJA9P57773 515 aa22.33■■□□□ 1.17
TNFRSF1A-212ENST00000539372 TNFAIP2Q03169 654 aa22.33■■□□□ 1.17
TNFRSF1A-212ENST00000539372 SLC30A10Q6XR72 485 aa22.33■■□□□ 1.17
TNFRSF1A-212ENST00000539372 FBXO16Q8IX29 292 aaPredicted RBP22.33■■□□□ 1.17
TNFRSF1A-212ENST00000539372 NUP133Q8WUM0 1156 aa22.33■■□□□ 1.17
TNFRSF1A-212ENST00000539372 UPF3AQ9H1J1 476 aaKnown RBP22.33■■□□□ 1.17
TNFRSF1A-212ENST00000539372 PDGFCQ9NRA1 345 aa22.33■■□□□ 1.17
TNFRSF1A-212ENST00000539372 TRIM43BA6NCK2 446 aa22.32■■□□□ 1.16
TNFRSF1A-212ENST00000539372 CALML3P27482 149 aa22.32■■□□□ 1.16
TNFRSF1A-212ENST00000539372 CST5P28325 142 aaPredicted RBP22.32■■□□□ 1.16
TNFRSF1A-212ENST00000539372 USH1GQ495M9 461 aa22.32■■□□□ 1.16
TNFRSF1A-212ENST00000539372 GNASQ5JWF2 1037 aa22.32■■□□□ 1.16
TNFRSF1A-212ENST00000539372 TRIM43Q96BQ3 446 aaPredicted RBP22.32■■□□□ 1.16
TNFRSF1A-212ENST00000539372 LCTP09848 1927 aa22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 ASGR1P07306 291 aa22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 BEX3Q00994 111 aa22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 LRIT3Q3SXY7 679 aa22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 RNF207Q6ZRF8 634 aa22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 CYB5R4Q7L1T6 521 aa22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 PCSK9Q8NBP7 692 aaKnown RBP22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 BADQ92934 168 aa22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 VTI1AQ96AJ9 217 aa22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 PNMA2Q9UL42 364 aa22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 WDR19Q8NEZ3 1342 aa22.31■■□□□ 1.16
TNFRSF1A-212ENST00000539372 LTBP2Q14767 1821 aa22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 CTAGE5O15320 804 aa22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 CLTBP09497 229 aa22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 PARP1P09874 1014 aaKnown RBP22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 SMPD1P17405 629 aa22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 ALDH5A1P51649 535 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 CDC37Q16543 378 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 ASPRV1Q53RT3 343 aa22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 IFIT1BQ5T764 474 aaKnown RBP22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 TAPT1Q6NXT6 567 aa22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 ADGRF4Q8IZF3 695 aa22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 GLT1D1Q96MS3 346 aa22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 ADD3Q9UEY8 706 aaKnown RBP22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 GNEQ9Y223 722 aaKnown RBP22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 LRRC37A2A6NM11 1700 aa22.3■■□□□ 1.16
TNFRSF1A-212ENST00000539372 SGSM2O43147 1006 aa22.29■■□□□ 1.16
TNFRSF1A-212ENST00000539372 CYP21A2P08686 494 aa22.29■■□□□ 1.16
TNFRSF1A-212ENST00000539372 ITGB8P26012 769 aa22.29■■□□□ 1.16
TNFRSF1A-212ENST00000539372 TMEM63BQ5T3F8 832 aa22.29■■□□□ 1.16
TNFRSF1A-212ENST00000539372 TLK2Q86UE8 772 aa22.29■■□□□ 1.16
TNFRSF1A-212ENST00000539372 MORC4Q8TE76 937 aa22.29■■□□□ 1.16
TNFRSF1A-212ENST00000539372 TAF6LQ9Y6J9 622 aa22.29■■□□□ 1.16
TNFRSF1A-212ENST00000539372 U3KPZ7 1027 aaPredicted RBP22.29■■□□□ 1.16
TNFRSF1A-212ENST00000539372 DYNC1LI2O43237 492 aaPredicted RBP22.28■■□□□ 1.16
TNFRSF1A-212ENST00000539372 DHX16O60231 1041 aaKnown RBP22.28■■□□□ 1.16
TNFRSF1A-212ENST00000539372 RPS6P62753 249 aaKnown RBP22.28■■□□□ 1.16
TNFRSF1A-212ENST00000539372 TRDNQ13061 729 aa22.28■■□□□ 1.16
TNFRSF1A-212ENST00000539372 SEC23AQ15436 765 aa22.28■■□□□ 1.16
TNFRSF1A-212ENST00000539372 KIAA1211Q6ZU35 1233 aa22.28■■□□□ 1.16
TNFRSF1A-212ENST00000539372 VAT1LQ9HCJ6 419 aa22.28■■□□□ 1.16
TNFRSF1A-212ENST00000539372 VTA1Q9NP79 307 aa22.28■■□□□ 1.16
TNFRSF1A-212ENST00000539372 DCDC2CA8MYV0 355 aa22.27■■□□□ 1.16
TNFRSF1A-212ENST00000539372 FAAP100Q0VG06 881 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms