RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ANKRD13CQ8N6S4 541 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 LINC00301Q8NCQ3 95 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 RPGRIP1Q96KN7 1286 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 PRKAB2O43741 272 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 DKC1O60832 514 aaKnown RBP eCLIP16.01■□□□□ 0.15
CACNB1-206ENST00000539338 BTDP43251 543 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 SCNN1DP51172 638 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 KCTD2Q14681 263 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 CABS1Q96KC9 395 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 PANK4Q9NVE7 773 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 GINS2Q9Y248 185 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 SSX2IPQ9Y2D8 614 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 ZBTB1Q9Y2K1 713 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 TET3O43151 1660 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 CCDC160A6NGH7 325 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 POLR2FP61218 127 aaKnown RBP16.01■□□□□ 0.15
CACNB1-206ENST00000539338 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.01■□□□□ 0.15
CACNB1-206ENST00000539338 FAM204AQ9H8W3 233 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 RCOR1Q9UKL0 485 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 EPN1Q9Y6I3 576 aaPredicted RBP16.01■□□□□ 0.15
CACNB1-206ENST00000539338 E7EVH7 732 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 CDC25BP30305 580 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 DCUN1D2Q6PH85 259 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 BARGINQ6ZT62 677 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 IQCDQ96DY2 449 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 HAUS4Q9H6D7 363 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 SEC31BQ9NQW1 1179 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 HYOU1Q9Y4L1 999 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 KIF1BO60333 1816 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 STAT1P42224 750 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 POLA2Q14181 598 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 CFAP157Q5JU67 520 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 DEFB132Q7Z7B7 95 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 AMFRQ9UKV5 643 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 PTCH1Q13635 1447 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 DYNLL1P63167 89 aaKnown RBP16■□□□□ 0.15
CACNB1-206ENST00000539338 NR5A1Q13285 461 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 NECTIN1Q15223 517 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 EZH2Q15910 746 aaKnown RBP16■□□□□ 0.15
CACNB1-206ENST00000539338 DOK7Q18PE1 504 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 STIM2Q9P246 746 aa16■□□□□ 0.15
CACNB1-206ENST00000539338 LONP1P36776 959 aaKnown RBP16■□□□□ 0.15
CACNB1-206ENST00000539338 FOXP1Q9H334 677 aaPredicted RBP16■□□□□ 0.15
CACNB1-206ENST00000539338 ADD2P35612 726 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 RASA3Q14644 834 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 ZSCAN26Q16670 478 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 ARMCX3Q9UH62 379 aaPredicted RBP15.99■□□□□ 0.15
CACNB1-206ENST00000539338 ZBTB33Q86T24 672 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.99■□□□□ 0.15
CACNB1-206ENST00000539338 DDX25Q9UHL0 483 aaKnown RBP15.99■□□□□ 0.15
CACNB1-206ENST00000539338 CD19P15391 556 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 RAET1EQ8TD07 263 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 AIFM3Q96NN9 605 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 TSPYL2Q9H2G4 693 aaPredicted RBP15.99■□□□□ 0.15
CACNB1-206ENST00000539338 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 A6NNZ2 444 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 PSMC4P43686 418 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 RESTQ13127 1097 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 TUBB8Q3ZCM7 444 aa15.99■□□□□ 0.15
CACNB1-206ENST00000539338 PPANQ9NQ55 473 aaKnown RBP15.99■□□□□ 0.15
CACNB1-206ENST00000539338 ENC1O14682 589 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 NDC80O14777 642 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 KRT26Q7Z3Y9 468 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 AZI2Q9H6S1 392 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 CDK12Q9NYV4 1490 aaPredicted RBP15.98■□□□□ 0.15
CACNB1-206ENST00000539338 NCOA3Q9Y6Q9 1424 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 CTNNA1P35221 906 aaKnown RBP15.98■□□□□ 0.15
CACNB1-206ENST00000539338 MTMR3Q13615 1198 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 TAOK1Q7L7X3 1001 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 RSPH3Q86UC2 560 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 KIAA0825Q8IV33 1275 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 SLC35F6Q8N357 371 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 ARHGAP31Q2M1Z3 1444 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 TCP10L2B9ZVM9 353 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 RBL2Q08999 1139 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 CEP85LQ5SZL2 805 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 LCORLQ8N3X6 602 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 CNOT6LQ96LI5 555 aaKnown RBP15.98■□□□□ 0.15
CACNB1-206ENST00000539338 GSDMAQ96QA5 445 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 RNF26Q9BY78 433 aaPredicted RBP15.98■□□□□ 0.15
CACNB1-206ENST00000539338 CRB1P82279 1406 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 KRIT1O00522 736 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 TNNI1P19237 187 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 CLUL1Q15846 466 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 MIER3Q7Z3K6 550 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 ADAT2Q7Z6V5 191 aaKnown RBP15.98■□□□□ 0.15
CACNB1-206ENST00000539338 PPP2R3CQ969Q6 453 aa15.98■□□□□ 0.15
CACNB1-206ENST00000539338 SEC31AO94979 1220 aaKnown RBP15.97■□□□□ 0.15
CACNB1-206ENST00000539338 CCDC14Q49A88 953 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 FAM26FQ5R3K3 315 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 FYB2Q5VWT5 728 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 MGARPQ8TDB4 240 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 TUBGCP2Q9BSJ2 902 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 ZNF804BA4D1E1 1349 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 KRT19P08727 400 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 ATP1A2P50993 1020 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 GNGT1P63211 74 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 ADAM9Q13443 819 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 NAA25Q14CX7 972 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms