RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MSCO60682 206 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 LEFTY1O75610 366 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 RASGRP1O95267 797 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 BPNT1O95861 308 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 ITGAVP06756 1048 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 LSSP48449 732 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 GPR85P60893 370 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 SLC7A5Q01650 507 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 KCNAB2Q13303 367 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 CDK5R2Q13319 367 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 PCBP1Q15365 356 aaKnown RBP eCLIP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 AKAP4Q5JQC9 854 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 CDPF1Q6NVV7 123 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 CC2D1AQ6P1N0 951 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 VHLLQ6RSH7 139 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 COL23A1Q86Y22 540 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 E2F7Q96AV8 911 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 MFSD3Q96ES6 412 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 HAUS7Q99871 368 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 DHRS4Q9BTZ2 278 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 MTFR1LQ9H019 292 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 ACSS3Q9H6R3 686 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 APOBEC2Q9Y235 224 aaKnown RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 R3HCC1Q9Y3T6 440 aaKnown RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 SUSD5O60279 629 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 CDC45O75419 566 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 RGS9O75916 674 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 SLITRK5O94991 958 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF205O95201 554 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 EYA4O95677 639 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 EPHA5P54756 1037 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 SSRP1Q08945 709 aaKnown RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 MTMR1Q13613 665 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 LRRC32Q14392 662 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 PLEKHG6Q3KR16 790 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 TMC3Q7Z5M5 1100 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 DNAJB8Q8NHS0 232 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 LPPQ93052 612 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 ACSBG1Q96GR2 724 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 Q96M66 194 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 SEMA6CQ9H3T2 930 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 NCOA5Q9HCD5 579 aaKnown RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 TRIM39Q9HCM9 518 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 H2AFY2Q9P0M6 372 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 TNFRSF10DQ9UBN6 386 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 EBF1Q9UH73 591 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 PNMA8BQ9ULN7 279 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF451Q9Y4E5 1061 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 F8W735 103 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 FRS3O43559 492 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 DNAJC8O75937 253 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 LCP1P13796 627 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 RAG1P15918 1043 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 KCNA6P17658 529 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 PLCG1P19174 1290 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 IGBP1P78318 339 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 MEF2AQ02078 507 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 SOX4Q06945 474 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 MORC3Q14149 939 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 NR1I3Q14994 352 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF385CQ66K41 422 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 TRIM59Q8IWR1 403 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 C7orf61Q8IZ16 206 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 FMR1NBQ8N0W7 255 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 Q8N3U1 123 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 AFAP1L2Q8N4X5 818 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF655Q8N720 491 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 C2CD4AQ8NCU7 369 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-204ENST00000539097 CPLX3Q8WVH0 158 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 TMEM87BQ96K49 555 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 AIFM3Q96NN9 605 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 COLEC11Q9BWP8 271 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 KLHL25Q9H0H3 589 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 GPRC5CQ9NQ84 441 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 PLA2G2DQ9UNK4 145 aa1.47□□□□□ -2.17
HIF1A-204ENST00000539097 ANO9A1A5B4 782 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 ZNF891A8MT65 544 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 GSG1L2A8MUP6 293 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 PDE8AO60658 829 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 LILRB5O75023 590 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 PGRP06401 933 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 RXRBP28702 533 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 GJA4P35212 333 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 ADMP35318 185 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 KIR3DS1Q14943 382 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 STYK1Q6J9G0 422 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 PKN3Q6P5Z2 889 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 ZPBP2Q6X784 338 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 ZNF227Q86WZ6 799 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 SPPL2CQ8IUH8 684 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 NLGN4XQ8N0W4 816 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 BTN2A2Q8WVV5 523 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 EDARADDQ8WWZ3 215 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 SLC39A13Q96H72 371 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 FAM167AQ96KS9 214 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 ORAI2Q96SN7 254 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 GPR27Q9NS67 375 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 DDX56Q9NY93 547 aaKnown RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 MCM8Q9UJA3 840 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms