RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 TEX13BQ9BXU2 312 aa19.86■□□□□ 0.77
CLN6-202ENST00000538696 SPATC1LQ9H0A9 340 aa19.86■□□□□ 0.77
CLN6-202ENST00000538696 RBM27Q9P2N5 1060 aaKnown RBP19.86■□□□□ 0.77
CLN6-202ENST00000538696 CCPG1Q9ULG6 757 aa19.86■□□□□ 0.77
CLN6-202ENST00000538696 KIF3AQ9Y496 699 aa19.86■□□□□ 0.77
CLN6-202ENST00000538696 DEXIO95424 95 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 STAT3P40763 770 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 AKAP17AQ02040 695 aaKnown RBP19.85■□□□□ 0.77
CLN6-202ENST00000538696 PLS1Q14651 629 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 USH1GQ495M9 461 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 WWC2Q6AWC2 1192 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 FBXO11Q86XK2 927 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 GPRC5AQ8NFJ5 357 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 GPKOWQ92917 476 aaPredicted RBP eCLIP19.85■□□□□ 0.77
CLN6-202ENST00000538696 AMNQ9BXJ7 453 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 MOV10L1Q9BXT6 1211 aaKnown RBP19.85■□□□□ 0.77
CLN6-202ENST00000538696 WBP1LQ9NX94 342 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 RIPK3Q9Y572 518 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 LCTP09848 1927 aa19.85■□□□□ 0.77
CLN6-202ENST00000538696 SCG2P13521 617 aa19.84■□□□□ 0.77
CLN6-202ENST00000538696 RIOX2Q8IUF8 465 aa19.84■□□□□ 0.77
CLN6-202ENST00000538696 JMYQ8N9B5 988 aa19.84■□□□□ 0.77
CLN6-202ENST00000538696 COA7Q96BR5 231 aa19.84■□□□□ 0.77
CLN6-202ENST00000538696 AIFM3Q96NN9 605 aa19.84■□□□□ 0.77
CLN6-202ENST00000538696 ZNFX1Q9P2E3 1918 aaKnown RBP19.84■□□□□ 0.77
CLN6-202ENST00000538696 DOCK3Q8IZD9 2030 aa19.84■□□□□ 0.77
CLN6-202ENST00000538696 ALAS1P13196 640 aa19.83■□□□□ 0.77
CLN6-202ENST00000538696 HEATR3Q7Z4Q2 680 aa19.83■□□□□ 0.77
CLN6-202ENST00000538696 SHISA4Q96DD7 197 aa19.83■□□□□ 0.77
CLN6-202ENST00000538696 ZNF236Q9UL36 1845 aa19.83■□□□□ 0.76
CLN6-202ENST00000538696 ABCB11O95342 1321 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 H3BQV1 296 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 STXBP3O00186 592 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 PDIA4P13667 645 aaKnown RBP19.82■□□□□ 0.76
CLN6-202ENST00000538696 TKFCQ3LXA3 575 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 FOXD4L6Q3SYB3 417 aaPredicted RBP19.82■□□□□ 0.76
CLN6-202ENST00000538696 IFFO2Q5TF58 517 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 TYW1BQ6NUM6 668 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 FOXD4L3Q6VB84 417 aaPredicted RBP19.82■□□□□ 0.76
CLN6-202ENST00000538696 FERMT3Q86UX7 667 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 SHCBP1Q8NEM2 672 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 PORCNQ9H237 461 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 RNF146Q9NTX7 359 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 PNMA2Q9UL42 364 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 PCDHA1Q9Y5I3 950 aa19.82■□□□□ 0.76
CLN6-202ENST00000538696 hCG_1984214I3L0E3 225 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 ERCC3P19447 782 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 CCNA1P78396 465 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 GUCY1B3Q02153 619 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 RESTQ13127 1097 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 MUM1L1Q5H9M0 696 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 ZNF713Q8N859 430 aaPredicted RBP19.81■□□□□ 0.76
CLN6-202ENST00000538696 BEGAINQ9BUH8 593 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 EFCC1Q9HA90 598 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 HOMER2Q9NSB8 354 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 BARHL2Q9NY43 387 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 TSKSQ9UJT2 592 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 PLXNA1Q9UIW2 1896 aa19.81■□□□□ 0.76
CLN6-202ENST00000538696 DDX11L8A8MPP1 907 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 SLC25A27O95847 323 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 COPB2P35606 906 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 MCTP1Q6DN14 999 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 NCAPG2Q86XI2 1143 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 CLEC4DQ8WXI8 215 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 WASF1Q92558 559 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 C8orf76Q96K31 380 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 TRERF1Q96PN7 1200 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 ALG1Q9BT22 464 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 VPS54Q9P1Q0 977 aa19.8■□□□□ 0.76
CLN6-202ENST00000538696 OPLAHO14841 1288 aa19.79■□□□□ 0.76
CLN6-202ENST00000538696 NAPAP54920 295 aa19.79■□□□□ 0.76
CLN6-202ENST00000538696 TRAF1Q13077 416 aa19.79■□□□□ 0.76
CLN6-202ENST00000538696 PPP1R18Q6NYC8 613 aa19.79■□□□□ 0.76
CLN6-202ENST00000538696 CHST13Q8NET6 341 aa19.79■□□□□ 0.76
CLN6-202ENST00000538696 ACAD9Q9H845 621 aa19.79■□□□□ 0.76
CLN6-202ENST00000538696 GJB4Q9NTQ9 266 aa19.79■□□□□ 0.76
CLN6-202ENST00000538696 GPR25O00155 361 aa19.78■□□□□ 0.76
CLN6-202ENST00000538696 NFIBO00712 420 aa19.78■□□□□ 0.76
CLN6-202ENST00000538696 CTGFP29279 349 aa19.78■□□□□ 0.76
CLN6-202ENST00000538696 ANP32EQ9BTT0 268 aa19.78■□□□□ 0.76
CLN6-202ENST00000538696 MROH8Q9H579 483 aa19.78■□□□□ 0.76
CLN6-202ENST00000538696 MRPL11Q9Y3B7 192 aaKnown RBP19.78■□□□□ 0.76
CLN6-202ENST00000538696 ECM2O94769 699 aaPredicted RBP19.77■□□□□ 0.76
CLN6-202ENST00000538696 LACTBP83111 547 aaPredicted RBP19.77■□□□□ 0.76
CLN6-202ENST00000538696 SP3Q02447 781 aa19.77■□□□□ 0.76
CLN6-202ENST00000538696 NOM1Q5C9Z4 860 aaKnown RBP19.77■□□□□ 0.76
CLN6-202ENST00000538696 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.77■□□□□ 0.76
CLN6-202ENST00000538696 SH3GLB2Q9NR46 395 aa19.77■□□□□ 0.76
CLN6-202ENST00000538696 FBXO40Q9UH90 709 aa19.77■□□□□ 0.76
CLN6-202ENST00000538696 MAPK4P31152 587 aa19.76■□□□□ 0.75
CLN6-202ENST00000538696 CAP1Q01518 475 aa19.76■□□□□ 0.75
CLN6-202ENST00000538696 WDR78Q5VTH9 848 aa19.76■□□□□ 0.75
CLN6-202ENST00000538696 FAM173BQ6P4H8 233 aa19.76■□□□□ 0.75
CLN6-202ENST00000538696 GPR142Q7Z601 462 aa19.76■□□□□ 0.75
CLN6-202ENST00000538696 CCDC148Q8NFR7 591 aa19.76■□□□□ 0.75
CLN6-202ENST00000538696 FBXO18Q8NFZ0 1043 aa19.76■□□□□ 0.75
CLN6-202ENST00000538696 ARHGAP39Q9C0H5 1083 aa19.76■□□□□ 0.75
CLN6-202ENST00000538696 A1CFQ9NQ94 594 aaKnown RBP19.76■□□□□ 0.75
CLN6-202ENST00000538696 ATP6V1DQ9Y5K8 247 aa19.76■□□□□ 0.75
CLN6-202ENST00000538696 CEP350Q5VT06 3117 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms