RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 KANSL2Q9H9L4 492 aa6.05□□□□□ -1.44
LINC02408-202ENST00000538573 NCOA5Q9HCD5 579 aaKnown RBP6.05□□□□□ -1.44
LINC02408-202ENST00000538573 NMRK2Q9NPI5 230 aa6.05□□□□□ -1.44
LINC02408-202ENST00000538573 MTMR4Q9NYA4 1195 aa6.05□□□□□ -1.44
LINC02408-202ENST00000538573 MTMR7Q9Y216 660 aa6.05□□□□□ -1.44
LINC02408-202ENST00000538573 MYH4Q9Y623 1939 aa6.05□□□□□ -1.44
LINC02408-202ENST00000538573 IGKV6D-41A0A0C4DH26 115 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 GOLGA8AA7E2F4 631 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 SOBPA7XYQ1 873 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 PHF20L1A8MW92 1017 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 CPLX1O14810 134 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 DHX16O60231 1041 aaKnown RBP6.04□□□□□ -1.44
LINC02408-202ENST00000538573 PPP1R12BO60237 982 aaPredicted RBP6.04□□□□□ -1.44
LINC02408-202ENST00000538573 CTNND1O60716 968 aaKnown RBP6.04□□□□□ -1.44
LINC02408-202ENST00000538573 DTNBO60941 627 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 TTLL1O95922 423 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 F12P00748 615 aaPredicted RBP6.04□□□□□ -1.44
LINC02408-202ENST00000538573 CALM1P0DP23 149 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 CALM2P0DP24 149 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 CALM3P0DP25 149 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 TOP1P11387 765 aaKnown RBP6.04□□□□□ -1.44
LINC02408-202ENST00000538573 EEF2P13639 858 aaKnown RBP6.04□□□□□ -1.44
LINC02408-202ENST00000538573 GUCY1A2P33402 732 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 NF2P35240 595 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 METAP2P50579 478 aaKnown RBP eCLIP6.04□□□□□ -1.44
LINC02408-202ENST00000538573 ICA1Q05084 483 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 PDE4DQ08499 809 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 SCRN1Q12765 414 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 CUL4AQ13619 759 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 MAP1SQ66K74 1059 aaPredicted RBP6.04□□□□□ -1.44
LINC02408-202ENST00000538573 VASH1Q7L8A9 365 aaPredicted RBP6.04□□□□□ -1.44
LINC02408-202ENST00000538573 MICU3Q86XE3 530 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 FANCBQ8NB91 859 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 PNMA1Q8ND90 353 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 GTF3C6Q969F1 213 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 ITPKCQ96DU7 683 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 CDCA5Q96FF9 252 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 WRNIP1Q96S55 665 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 ZFAND3Q9H8U3 227 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 FZD1Q9UP38 647 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 SMC3Q9UQE7 1217 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.04□□□□□ -1.44
LINC02408-202ENST00000538573 PLIN4Q96Q06 1357 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 ATAD5Q96QE3 1844 aa6.04□□□□□ -1.44
LINC02408-202ENST00000538573 CCDC196A0A1B0GTZ2 297 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 PPFIA3O75145 1194 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 USP2O75604 605 aaPredicted RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 DDAH1O94760 285 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 ASNSP08243 561 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 CDC27P30260 824 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 INPP5BP32019 993 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 ADD1P35611 737 aaKnown RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 IREB2P48200 963 aaKnown RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 ST3GAL1Q11201 340 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 RTN1Q16799 776 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 MYSM1Q5VVJ2 828 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 CPLX2Q6PUV4 134 aaKnown RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 LDHDQ86WU2 507 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 SIAH1Q8IUQ4 282 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 LRRC47Q8N1G4 583 aaKnown RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 CCDC82Q8N4S0 544 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 CTCFLQ8NI51 663 aaPredicted RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 ZKSCAN4Q969J2 545 aaPredicted RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 DDX11Q96FC9 970 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 INTS4Q96HW7 963 aaKnown RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 ZNF408Q9H9D4 720 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 GPBP1L1Q9HC44 474 aaPredicted RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 ARHGEF10LQ9HCE6 1279 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 CWC22Q9HCG8 908 aaKnown RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 PICK1Q9NRD5 415 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 NYAP2Q9P242 653 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 ZNF112Q9UJU3 913 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 ZBTB21Q9ULJ3 1066 aa6.03□□□□□ -1.44
LINC02408-202ENST00000538573 ISY1Q9ULR0 285 aaKnown RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 GREB1LQ9C091 1923 aaPredicted RBP6.03□□□□□ -1.44
LINC02408-202ENST00000538573 USP17L5A8MUK1 530 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 TRAF5O00463 557 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 JAK2O60674 1132 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 CDKL5O76039 1030 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 CTDNEP1O95476 244 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 PARP1P09874 1014 aaKnown RBP6.02□□□□□ -1.45
LINC02408-202ENST00000538573 GOLGA8HP0CJ92 632 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 GJB2P29033 226 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 KIF5BP33176 963 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 NOVP48745 357 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 RCAN1P53805 252 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 FMR1Q06787 632 aaKnown RBP eCLIP6.02□□□□□ -1.45
LINC02408-202ENST00000538573 SSRP1Q08945 709 aaKnown RBP6.02□□□□□ -1.45
LINC02408-202ENST00000538573 TROAPQ12815 778 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 PPP2R5BQ15173 497 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 ZYXQ15942 572 aaKnown RBP6.02□□□□□ -1.45
LINC02408-202ENST00000538573 QPCTQ16769 361 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 ARMC9Q7Z3E5 817 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 CCDC84Q86UT8 332 aaPredicted RBP6.02□□□□□ -1.45
LINC02408-202ENST00000538573 SCYL3Q8IZE3 742 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 CMTR1Q8N1G2 835 aaKnown RBP6.02□□□□□ -1.45
LINC02408-202ENST00000538573 FAM184AQ8NB25 1140 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 MKL1Q969V6 931 aa6.02□□□□□ -1.45
LINC02408-202ENST00000538573 KLRG1Q96E93 195 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms