RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SNHG28P0DPA3 235 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 IRX5P78411 483 aaPredicted RBP4.09□□□□□ -1.75
PTPN22-211ENST00000538253 C17orf99Q6UX52 265 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 NME8Q8N427 588 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 FANCBQ8NB91 859 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 PCSK9Q8NBP7 692 aaKnown RBP4.09□□□□□ -1.75
PTPN22-211ENST00000538253 NSUN6Q8TEA1 469 aaKnown RBP4.09□□□□□ -1.75
PTPN22-211ENST00000538253 DYNLL2Q96FJ2 89 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 JPH2Q9BR39 696 aaPredicted RBP4.09□□□□□ -1.75
PTPN22-211ENST00000538253 PAGR1Q9BTK6 254 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 POLR3EQ9NVU0 708 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 FAM155AB1AL88 458 aaPredicted RBP4.09□□□□□ -1.76
PTPN22-211ENST00000538253 TLR3O15455 904 aaKnown RBP4.09□□□□□ -1.76
PTPN22-211ENST00000538253 PRPF3O43395 683 aaKnown RBP4.09□□□□□ -1.76
PTPN22-211ENST00000538253 PARNO95453 639 aaKnown RBP4.09□□□□□ -1.76
PTPN22-211ENST00000538253 EGFRP00533 1210 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 CYP21A2P08686 494 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 POTEIP0CG38 1075 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 POTEJP0CG39 1038 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 BCRP11274 1271 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 IFNAR1P17181 557 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 CCND2P30279 289 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 PSMC4P43686 418 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 PDE4DQ08499 809 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 MYBPC2Q14324 1141 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 FAM83BQ5T0W9 1011 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 ATL3Q6DD88 541 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 ZNF589Q86UQ0 364 aaPredicted RBP4.09□□□□□ -1.76
PTPN22-211ENST00000538253 ZNF384Q8TF68 577 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 KIFC2Q96AC6 838 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 MS4A4AQ96JQ5 239 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 KATNAL1Q9BW62 490 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 GTPBP4Q9BZE4 634 aaKnown RBP4.09□□□□□ -1.76
PTPN22-211ENST00000538253 RANBP17Q9H2T7 1088 aaKnown RBP4.09□□□□□ -1.76
PTPN22-211ENST00000538253 SLC38A10Q9HBR0 1119 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 RNF146Q9NTX7 359 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 FAM184BQ9ULE4 1060 aa4.09□□□□□ -1.76
PTPN22-211ENST00000538253 NID2Q14112 1375 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 NAV1Q8NEY1 1877 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 WTIPA6NIX2 430 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 TGFB3P10600 412 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 CYP2D6P10635 497 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 HSPA8P11142 646 aaKnown RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 PTPREP23469 700 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 ABCD1P33897 745 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 ZNF76P36508 570 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 TRAPPC10P48553 1259 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 ADCY7P51828 1080 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 EVCP57679 992 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 LACTBP83111 547 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 SATB1Q01826 763 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 SNRNP48Q6IEG0 339 aaKnown RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 NIPA1Q7RTP0 329 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 APBB1IPQ7Z5R6 666 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 INTS4Q96HW7 963 aaKnown RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 SEC62Q99442 399 aaKnown RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 MTIF3Q9H2K0 278 aaKnown RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 HMX1Q9NP08 348 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 GPHNQ9NQX3 736 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 EMILIN3Q9NT22 766 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 ZSWIM5Q9P217 1185 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 SMC3Q9UQE7 1217 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 NR2E3Q9Y5X4 410 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 ASTN2O75129 1339 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 MROH7Q68CQ1 1323 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 CCDC194A0A1B0GVG4 234 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 KBTBD13C9JR72 458 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 H3BQV1 296 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 VWA5AO00534 786 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 ABCB7O75027 752 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 PDHBP11177 359 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 GNAT1P11488 350 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 SCP2P22307 547 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 NEK4P51957 841 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 NAPAP54920 295 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 CDC42EP1Q00587 391 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 NEDD9Q14511 834 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 TTLL4Q14679 1199 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 STXBP2Q15833 593 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 SLC9C1Q4G0N8 1177 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 FAM47AQ5JRC9 791 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 IQSEC1Q6DN90 963 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 MOXD1Q6UVY6 613 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 TMTC3Q6ZXV5 915 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 ENAHQ8N8S7 591 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 RDM1Q8NG50 284 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 ATL2Q8NHH9 583 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 ERMNQ8TAM6 284 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 CLMNQ96JQ2 1002 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 MAP7D2Q96T17 732 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 ABHD16BQ9H3Z7 469 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 TRIM17Q9Y577 477 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 SNX14Q9Y5W7 946 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 NDUFB9Q9Y6M9 179 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 RPS6KL1Q9Y6S9 549 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 SCN9AQ15858 1988 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 PALM3A6NDB9 673 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 SPDYE16A6NNV3 312 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-211ENST00000538253 PFKFB2O60825 505 aa4.08□□□□□ -1.76
PTPN22-211ENST00000538253 PRDM1O75626 825 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms