RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CLIC4Q9Y696 253 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 COBLO75128 1261 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 RHOXF2BP0C7M4 288 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 CBX1P83916 185 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 MLKLQ8NB16 471 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 RAB3IL1Q8TBN0 382 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 SYMPKQ92797 1274 aaKnown RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 RHOXF2Q9BQY4 288 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 NUB1Q9Y5A7 615 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 PTPRMP28827 1452 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 OATP04181 439 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 PFKFB1P16118 471 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 IRX5P78411 483 aaPredicted RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 PPP2R5CQ13362 524 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 TRIM14Q14142 442 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 SFMBT2Q5VUG0 894 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 RNF207Q6ZRF8 634 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 ATP6V0A1Q93050 837 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 ZBED2Q9BTP6 218 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 TM6SF1Q9BZW5 370 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 DIP2CQ9Y2E4 1556 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 OSTNP61366 133 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 KLHL30Q0D2K2 578 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 ADCK5Q3MIX3 580 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 SLC9C1Q4G0N8 1177 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 SYT10Q6XYQ8 523 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 FAM160B2Q86V87 743 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 FOXP4Q8IVH2 680 aaPredicted RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 UBL4BQ8N7F7 174 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 TBCKQ8TEA7 893 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 IPO4Q8TEX9 1081 aaKnown RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 CEP170P1Q96L14 293 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 ATP2C2O75185 946 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 XRCC5P13010 732 aaKnown RBP5.91□□□□□ -1.46
LRP6-203ENST00000538239 MXRA7P84157 204 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 EPHA10Q5JZY3 1008 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.91□□□□□ -1.46
LRP6-203ENST00000538239 V9GYY5 206 aaPredicted RBP5.91□□□□□ -1.46
LRP6-203ENST00000538239 PIK3C2BO00750 1634 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 PPRC1Q5VV67 1664 aaKnown RBP5.91□□□□□ -1.46
LRP6-203ENST00000538239 NRKQ7Z2Y5 1582 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 H0YCG3 227 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 CRCPO75575 148 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 ITKQ08881 620 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 ODR4Q5SWX8 454 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 RRAGAQ7L523 313 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 UBLCP1Q8WVY7 318 aaPredicted RBP5.91□□□□□ -1.46
LRP6-203ENST00000538239 KMT5AQ9NQR1 393 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 LAMC1P11047 1609 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 IQCA1LA6NCM1 817 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 USP17L5A8MUK1 530 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 GNA14O95837 355 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 ASNSP08243 561 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 CALCOCO2Q13137 446 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 KRT81Q14533 505 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 TYW1BQ6NUM6 668 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 TMEM179Q6ZVK1 233 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 SLC7A3Q8WY07 619 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 SLF1Q9BQI6 1058 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 NUP58Q9BVL2 599 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 ELP3Q9H9T3 547 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 C1orf112Q9NSG2 853 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 STIM2Q9P246 746 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 GEN1Q17RS7 908 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 KIAA1841Q6NSI8 718 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 SND1Q7KZF4 910 aaKnown RBP eCLIP5.91□□□□□ -1.46
LRP6-203ENST00000538239 MICALL2Q8IY33 904 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 MICAL1Q8TDZ2 1067 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 FAM49AQ9H0Q0 323 aaPredicted RBP5.91□□□□□ -1.46
LRP6-203ENST00000538239 CSRNP2Q9H175 543 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 NFE2L3Q9Y4A8 694 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 COL4A3BPQ9Y5P4 624 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 TLDC2A0PJX2 215 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 HNRNPDLO14979 420 aaKnown RBP5.91□□□□□ -1.46
LRP6-203ENST00000538239 STAM2O75886 525 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 ZNF853P0CG23 659 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 TNNC1P63316 161 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 NOLC1Q14978 699 aaKnown RBP eCLIP5.91□□□□□ -1.46
LRP6-203ENST00000538239 U2AF1L4Q8WU68 220 aaKnown RBP5.91□□□□□ -1.46
LRP6-203ENST00000538239 KCNK9Q9NPC2 374 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 DISC1Q9NRI5 854 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 MTRF1LQ9UGC7 380 aaKnown RBP5.91□□□□□ -1.46
LRP6-203ENST00000538239 RIPOR2Q9Y4F9 1068 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 SSH2Q76I76 1423 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 CYP21A2P08686 494 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 SRGAP2CP0DJJ0 459 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 MORC3Q14149 939 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 PODNQ7Z5L7 613 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 SP8Q8IXZ3 490 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 KIAA1524Q8TCG1 905 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 GJA10Q969M2 543 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 ANKRD36BP1Q96IX9 119 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 CBX8Q9HC52 389 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 SEPT10Q9P0V9 454 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 ZSWIM5Q9P217 1185 aa5.91□□□□□ -1.46
LRP6-203ENST00000538239 RPN1P04843 607 aaKnown RBP5.9□□□□□ -1.46
LRP6-203ENST00000538239 PSAPP07602 524 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 METTL23Q86XA0 190 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 TRERF1Q96PN7 1200 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 MMP19Q99542 508 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms