RNA–Protein interactions for RNA: ENST00000536582.5

PAAF1-208, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 2

Gene PAAF1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-208ENST00000536582 FUT2Q10981 343 aa11.21□□□□□ -0.61
PAAF1-208ENST00000536582 CUL4AQ13619 759 aa11.21□□□□□ -0.61
PAAF1-208ENST00000536582 COG2Q14746 738 aa11.21□□□□□ -0.61
PAAF1-208ENST00000536582 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
PAAF1-208ENST00000536582 FAM160B2Q86V87 743 aa11.21□□□□□ -0.61
PAAF1-208ENST00000536582 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.61
PAAF1-208ENST00000536582 ATG4CQ96DT6 458 aa11.21□□□□□ -0.61
PAAF1-208ENST00000536582 LZTS2Q9BRK4 669 aa11.21□□□□□ -0.61
PAAF1-208ENST00000536582 ASCC2Q9H1I8 757 aaPredicted RBP11.21□□□□□ -0.61
PAAF1-208ENST00000536582 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.61
PAAF1-208ENST00000536582 CTDP1Q9Y5B0 961 aaPredicted RBP11.21□□□□□ -0.61
PAAF1-208ENST00000536582 NID2Q14112 1375 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 RLFQ13129 1914 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 HSPA6P17066 643 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 IFNAR1P17181 557 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 AKAP17AQ02040 695 aaKnown RBP11.2□□□□□ -0.62
PAAF1-208ENST00000536582 PABPC4Q13310 644 aaKnown RBP eCLIP11.2□□□□□ -0.62
PAAF1-208ENST00000536582 PPP2R5BQ15173 497 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 BTNL9Q6UXG8 535 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 ANKRD23Q86SG2 305 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 CPXCR1Q8N123 301 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 PRPF38AQ8NAV1 312 aaKnown RBP11.2□□□□□ -0.62
PAAF1-208ENST00000536582 RRP36Q96EU6 259 aaKnown RBP11.2□□□□□ -0.62
PAAF1-208ENST00000536582 AIFM3Q96NN9 605 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 KCNK17Q96T54 332 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 PAGR1Q9BTK6 254 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 RIOX1Q9H6W3 641 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 ORC3Q9UBD5 711 aaPredicted RBP11.2□□□□□ -0.62
PAAF1-208ENST00000536582 PPP1R9AQ9ULJ8 1098 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 SMC3Q9UQE7 1217 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 PARP14Q460N5 1801 aa11.2□□□□□ -0.62
PAAF1-208ENST00000536582 COL11A1P12107 1806 aaPredicted RBP11.19□□□□□ -0.62
PAAF1-208ENST00000536582 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
PAAF1-208ENST00000536582 TK2O00142 265 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 ZBED4O75132 1171 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 CDKL5O76039 1030 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 FMNL1O95466 1100 aaPredicted RBP11.19□□□□□ -0.62
PAAF1-208ENST00000536582 GJB2P29033 226 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 HOXA7P31268 230 aaPredicted RBP11.19□□□□□ -0.62
PAAF1-208ENST00000536582 SREBF2Q12772 1141 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 NOGQ13253 232 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 PLS1Q14651 629 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 CDC37Q16543 378 aaPredicted RBP11.19□□□□□ -0.62
PAAF1-208ENST00000536582 QRICH1Q2TAL8 776 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 USH1GQ495M9 461 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 ADGRD1Q6QNK2 874 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 TRIM22Q8IYM9 498 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 GPKOWQ92917 476 aaPredicted RBP eCLIP11.19□□□□□ -0.62
PAAF1-208ENST00000536582 SPZ1Q9BXG8 430 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 RAVER2Q9HCJ3 691 aaKnown RBP11.19□□□□□ -0.62
PAAF1-208ENST00000536582 GJB4Q9NTQ9 266 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 HOXC10Q9NYD6 342 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 SEC63Q9UGP8 760 aaKnown RBP11.19□□□□□ -0.62
PAAF1-208ENST00000536582 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.19□□□□□ -0.62
PAAF1-208ENST00000536582 SMCHD1A6NHR9 2005 aa11.19□□□□□ -0.62
PAAF1-208ENST00000536582 SPDYE16A6NNV3 312 aaPredicted RBP11.18□□□□□ -0.62
PAAF1-208ENST00000536582 VWA5AO00534 786 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 PRPF3O43395 683 aaKnown RBP11.18□□□□□ -0.62
PAAF1-208ENST00000536582 PLA2G6O60733 806 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 PPP1R11O60927 126 aaPredicted RBP11.18□□□□□ -0.62
PAAF1-208ENST00000536582 FDPSP14324 419 aaKnown RBP11.18□□□□□ -0.62
PAAF1-208ENST00000536582 INHBEP58166 350 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 HERVK_113P62684 666 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 TAF1CQ15572 869 aaPredicted RBP11.18□□□□□ -0.62
PAAF1-208ENST00000536582 PKN1Q16512 942 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 HEATR3Q7Z4Q2 680 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 FAM184AQ8NB25 1140 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 SMARCC2Q8TAQ2 1214 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 SMCR8Q8TEV9 937 aaPredicted RBP11.18□□□□□ -0.62
PAAF1-208ENST00000536582 COA7Q96BR5 231 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 AGBL1Q96MI9 1066 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 LLPHQ9BRT6 129 aaKnown RBP11.18□□□□□ -0.62
PAAF1-208ENST00000536582 ADAM33Q9BZ11 813 aa11.18□□□□□ -0.62
PAAF1-208ENST00000536582 PNMA6FA0A0J9YX94 578 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 ZBTB5O15062 677 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 PTPREP23469 700 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 SMARCA1P28370 1054 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 TM4SF4P48230 202 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 GUCY1B3Q02153 619 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 TMEM132BQ14DG7 1078 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 OTUD7BQ6GQQ9 843 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 FBXO11Q86XK2 927 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 ALG1Q9BT22 464 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 RNF26Q9BY78 433 aaPredicted RBP11.17□□□□□ -0.62
PAAF1-208ENST00000536582 RANBP17Q9H2T7 1088 aaKnown RBP11.17□□□□□ -0.62
PAAF1-208ENST00000536582 HOMER2Q9NSB8 354 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 BTBD7Q9P203 1132 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 CPA4Q9UI42 421 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 PNMA3Q9UL41 463 aa11.17□□□□□ -0.62
PAAF1-208ENST00000536582 DEXIO95424 95 aa11.16□□□□□ -0.62
PAAF1-208ENST00000536582 ALAS1P13196 640 aa11.16□□□□□ -0.62
PAAF1-208ENST00000536582 SCG2P13521 617 aa11.16□□□□□ -0.62
PAAF1-208ENST00000536582 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
PAAF1-208ENST00000536582 PFKFB3Q16875 520 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-208ENST00000536582 WWC2Q6AWC2 1192 aa11.16□□□□□ -0.62
PAAF1-208ENST00000536582 ANKRD13CQ8N6S4 541 aa11.16□□□□□ -0.62
PAAF1-208ENST00000536582 MTMR8Q96EF0 704 aa11.16□□□□□ -0.62
PAAF1-208ENST00000536582 INTS4Q96HW7 963 aaKnown RBP11.16□□□□□ -0.62
PAAF1-208ENST00000536582 IPO9Q96P70 1041 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms