RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 RNF208Q9H0X6 261 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 UNC93B1Q9H1C4 597 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 CEP83Q9Y592 693 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 LOC285556D6RIA3 1793 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 CEP290O15078 2479 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 E7EWF7 191 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 PEX10O60683 326 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 SMC2O95347 1197 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 CTDNEP1O95476 244 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 GUCY2CP25092 1073 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 CASQ1P31415 396 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 UBXN2AP68543 259 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 GPS2Q13227 327 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 PABPC4Q13310 644 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 FAM110CQ1W6H9 321 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 CERS3Q8IU89 383 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 LINC00301Q8NCQ3 95 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 SLAIN1Q8ND83 568 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 P2RX7Q99572 595 aaKnown RBP13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 ZBTB21Q9ULJ3 1066 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 PCDHA7Q9UN72 937 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 MYH1P12882 1939 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 SPTLC2O15270 562 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 ZSCAN12O43309 604 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 GJB1P08034 283 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 GCLCP48506 637 aaPredicted RBP13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 KMT5BQ4FZB7 885 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 EDC3Q96F86 508 aaKnown RBP13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 RIOK1Q9BRS2 568 aaKnown RBP13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 TMOD4Q9NZQ9 345 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
CHRNB1-202ENST00000536404 USP17L10C9JJH3 530 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 CDKL5O76039 1030 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 GH2P01242 217 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 INHAP05111 366 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 CCDC172P0C7W6 258 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 CMA1P23946 247 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 CALRP27797 417 aaKnown RBP13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 GJA8P48165 433 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 IRF5Q13568 498 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 IMMTQ16891 758 aaKnown RBP13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 STOX1Q6ZVD7 989 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 BANK1Q8NDB2 785 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 COA7Q96BR5 231 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 GINM1Q9NU53 330 aa13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 HOOK1Q9UJC3 728 aaKnown RBP13.16□□□□□ -0.3
CHRNB1-202ENST00000536404 MAGEB6P1A0A0J9YX57 407 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 ERICH4A6NGS2 130 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 C19orf81C9J6K1 198 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 GOLIM4O00461 696 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 DTNBO60941 627 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 HSPD1P10809 573 aaKnown RBP13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 PDE6AP16499 860 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 HNRNPH2P55795 449 aaKnown RBP13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 EVX2Q03828 476 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 TTF1Q15361 905 aaPredicted RBP13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 ELF2Q15723 593 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 SLC9C2Q5TAH2 1124 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 TATDN1Q6P1N9 297 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 NKX2-3Q8TAU0 364 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 PXYLP1Q8TE99 480 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 PPP1R13BQ96KQ4 1090 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 TRMT1Q9NXH9 659 aaKnown RBP13.15□□□□□ -0.3
CHRNB1-202ENST00000536404 ZNF532Q9HCE3 1301 aa13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 USP27XA6NNY8 438 aa13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 CPLX1O14810 134 aa13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 H2AFXP16104 143 aaPredicted RBP13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 PLCD1P51178 756 aa13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 ETF1P62495 437 aaKnown RBP13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 CCT2P78371 535 aaKnown RBP13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 FBXO38Q6PIJ6 1188 aa13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 ELOA2Q8IYF1 753 aaPredicted RBP13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 XPO4Q9C0E2 1151 aaKnown RBP13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 TXNRD2Q9NNW7 524 aa13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 IFNKQ9P0W0 207 aa13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 MORF4L1Q9UBU8 362 aa13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 SERPINB13Q9UIV8 391 aa13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 GJD2Q9UKL4 321 aa13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 V9GYY5 206 aaPredicted RBP13.14□□□□□ -0.31
CHRNB1-202ENST00000536404 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 HERVK_113P62684 666 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 SATB1Q01826 763 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 ZYXQ15942 572 aaKnown RBP13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 E4F1Q66K89 784 aaPredicted RBP13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms