RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ZSCAN10Q96SZ4 725 aaPredicted RBP16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 KATNBL1Q9H079 304 aa16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 KAT14Q9H8E8 782 aa16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 MCM3APO60318 1980 aa16.77■□□□□ 0.27
RTN3P1-201ENST00000536295 ASTN1O14525 1302 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 NFIBO00712 420 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 SNHG28P0DPA3 235 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 TLE2Q04725 743 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 BAATQ14032 418 aaPredicted RBP16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 KCNA10Q16322 511 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 CCDC178Q5BJE1 867 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 EEPD1Q7L9B9 569 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 SH3RF1Q7Z6J0 888 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 KLHDC9Q8NEP7 349 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 TSEN34Q9BSV6 310 aaKnown RBP16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 KRT23Q9C075 422 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 CPVLQ9H3G5 476 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 SPC25Q9HBM1 224 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 STARD7Q9NQZ5 370 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 PDLIM7Q9NR12 457 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 ZSWIM5Q9P217 1185 aa16.76■□□□□ 0.27
RTN3P1-201ENST00000536295 TNKSO95271 1327 aa16.75■□□□□ 0.27
RTN3P1-201ENST00000536295 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.75■□□□□ 0.27
RTN3P1-201ENST00000536295 PTPDC1A2A3K4 754 aa16.75■□□□□ 0.27
RTN3P1-201ENST00000536295 PQBP1O60828 265 aaKnown RBP16.75■□□□□ 0.27
RTN3P1-201ENST00000536295 GPATCH4Q5T3I0 446 aaKnown RBP16.75■□□□□ 0.27
RTN3P1-201ENST00000536295 C1orf53Q5VUE5 145 aa16.75■□□□□ 0.27
RTN3P1-201ENST00000536295 FBXO16Q8IX29 292 aaPredicted RBP16.75■□□□□ 0.27
RTN3P1-201ENST00000536295 ENAHQ8N8S7 591 aaPredicted RBP16.75■□□□□ 0.27
RTN3P1-201ENST00000536295 NUP133Q8WUM0 1156 aa16.75■□□□□ 0.27
RTN3P1-201ENST00000536295 RUFY2Q8WXA3 655 aa16.75■□□□□ 0.27
RTN3P1-201ENST00000536295 SZT2Q5T011 3432 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 RAD50Q92878 1312 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 TRIM43BA6NCK2 446 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 MOXD2PA6NHM9 499 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 CHMLP26374 656 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 CALML3P27482 149 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 NT5C2P49902 561 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 TNFAIP2Q03169 654 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 USH1GQ495M9 461 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 GNASQ5JWF2 1037 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 CCSAPQ6IQ19 270 aaPredicted RBP16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 SLC30A10Q6XR72 485 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 VTI1AQ96AJ9 217 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 TRIM43Q96BQ3 446 aaPredicted RBP16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 UBAC1Q9BSL1 405 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 CNNM2Q9H8M5 875 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 PDGFCQ9NRA1 345 aa16.74■□□□□ 0.27
RTN3P1-201ENST00000536295 ASGR1P07306 291 aa16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 CLTBP09497 229 aa16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 PTGS1P23219 599 aa16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 CST5P28325 142 aaPredicted RBP16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 GJA9P57773 515 aa16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 BEX3Q00994 111 aa16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 PTH1RQ03431 593 aa16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 LRIT3Q3SXY7 679 aa16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 PCSK9Q8NBP7 692 aaKnown RBP16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 CLEC4DQ8WXI8 215 aa16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 BADQ92934 168 aa16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 GLT1D1Q96MS3 346 aa16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 UPF3AQ9H1J1 476 aaKnown RBP16.73■□□□□ 0.27
RTN3P1-201ENST00000536295 DHX16O60231 1041 aaKnown RBP16.72■□□□□ 0.27
RTN3P1-201ENST00000536295 ALDH5A1P51649 535 aaPredicted RBP16.72■□□□□ 0.27
RTN3P1-201ENST00000536295 IFIT1BQ5T764 474 aaKnown RBP16.72■□□□□ 0.27
RTN3P1-201ENST00000536295 RNF207Q6ZRF8 634 aa16.72■□□□□ 0.27
RTN3P1-201ENST00000536295 TLK2Q86UE8 772 aa16.72■□□□□ 0.27
RTN3P1-201ENST00000536295 ANKS1AQ92625 1134 aa16.72■□□□□ 0.27
RTN3P1-201ENST00000536295 ADD3Q9UEY8 706 aaKnown RBP16.72■□□□□ 0.27
RTN3P1-201ENST00000536295 PNMA2Q9UL42 364 aa16.72■□□□□ 0.27
RTN3P1-201ENST00000536295 LTBP2Q14767 1821 aa16.72■□□□□ 0.27
RTN3P1-201ENST00000536295 WDR19Q8NEZ3 1342 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 SMPD1P17405 629 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 TRDNQ13061 729 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 CDC37Q16543 378 aaPredicted RBP16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 ASPRV1Q53RT3 343 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 TMEM63BQ5T3F8 832 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 TAPT1Q6NXT6 567 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 CYB5R4Q7L1T6 521 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 ADGRF4Q8IZF3 695 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 AP5M1Q9H0R1 490 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 VAT1LQ9HCJ6 419 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 TMEM39AQ9NV64 488 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 GNEQ9Y223 722 aaKnown RBP16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 LAMA3Q16787 3333 aa16.71■□□□□ 0.27
RTN3P1-201ENST00000536295 LRRC37A2A6NM11 1700 aa16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 LCTP09848 1927 aa16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 DCDC2CA8MYV0 355 aa16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 CTAGE5O15320 804 aa16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 DYNC1LI2O43237 492 aaPredicted RBP16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 CYP21A2P08686 494 aa16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 PARP1P09874 1014 aaKnown RBP16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 ITGB8P26012 769 aa16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 RPS6P62753 249 aaKnown RBP16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 KIAA1211Q6ZU35 1233 aa16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 VTA1Q9NP79 307 aa16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 U3KPZ7 1027 aaPredicted RBP16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 ELP1O95163 1332 aa16.7■□□□□ 0.26
RTN3P1-201ENST00000536295 SGSM2O43147 1006 aa16.69■□□□□ 0.26
RTN3P1-201ENST00000536295 RAG1P15918 1043 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms