RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 FBXO11Q86XK2 927 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 ABRAQ8N0Z2 381 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 SOCS4Q8WXH5 440 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 RRP36Q96EU6 259 aaKnown RBP13.99□□□□□ -0.17
CHD4-203ENST00000535717 MMP19Q99542 508 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 NUDT12Q9BQG2 462 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 MCOLN1Q9GZU1 580 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 ACAD9Q9H845 621 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 FBXO40Q9UH90 709 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 PNMA2Q9UL42 364 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 PTCH2Q9Y6C5 1203 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 CNTNAP5Q8WYK1 1306 aa13.98□□□□□ -0.17
CHD4-203ENST00000535717 hCG_1642624A0A1W2PR95 340 aa13.98□□□□□ -0.17
CHD4-203ENST00000535717 MAP2K5Q13163 448 aa13.98□□□□□ -0.17
CHD4-203ENST00000535717 IRF5Q13568 498 aa13.98□□□□□ -0.17
CHD4-203ENST00000535717 KCTD2Q14681 263 aa13.98□□□□□ -0.17
CHD4-203ENST00000535717 FBXO46Q6PJ61 603 aaPredicted RBP13.98□□□□□ -0.17
CHD4-203ENST00000535717 RAET1EQ8TD07 263 aa13.98□□□□□ -0.17
CHD4-203ENST00000535717 CLEC4DQ8WXI8 215 aa13.98□□□□□ -0.17
CHD4-203ENST00000535717 AMNQ9BXJ7 453 aa13.98□□□□□ -0.17
CHD4-203ENST00000535717 MYH6P13533 1939 aa13.98□□□□□ -0.17
CHD4-203ENST00000535717 ZNF236Q9UL36 1845 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 ABCB11O95342 1321 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 CENPFP49454 3210 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 NFIBO00712 420 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 PFKFB2O60825 505 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 COBLO75128 1261 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 LARGE1O95461 756 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 PGK2P07205 417 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 CYP2B6P20813 491 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 RGS2P41220 211 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 NTRK3Q16288 839 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 ANKRD35Q8N283 1001 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 A1CFQ9NQ94 594 aaKnown RBP13.97□□□□□ -0.17
CHD4-203ENST00000535717 PCDHA1Q9Y5I3 950 aa13.97□□□□□ -0.17
CHD4-203ENST00000535717 V9GY48 417 aaPredicted RBP13.97□□□□□ -0.17
CHD4-203ENST00000535717 ZNFX1Q9P2E3 1918 aaKnown RBP13.97□□□□□ -0.17
CHD4-203ENST00000535717 DNAJC25-GNG10A0A024R161 153 aa13.96□□□□□ -0.17
CHD4-203ENST00000535717 ADCY3O60266 1144 aa13.96□□□□□ -0.17
CHD4-203ENST00000535717 HOXC6P09630 235 aa13.96□□□□□ -0.17
CHD4-203ENST00000535717 XRCC5P13010 732 aaKnown RBP13.96□□□□□ -0.17
CHD4-203ENST00000535717 ELNP15502 786 aa13.96□□□□□ -0.17
CHD4-203ENST00000535717 SCRN1Q12765 414 aa13.96□□□□□ -0.17
CHD4-203ENST00000535717 ME3Q16798 604 aa13.96□□□□□ -0.17
CHD4-203ENST00000535717 DPP9Q86TI2 863 aa13.96□□□□□ -0.17
CHD4-203ENST00000535717 NPLOC4Q8TAT6 608 aa13.96□□□□□ -0.17
CHD4-203ENST00000535717 DDX11Q96FC9 970 aa13.96□□□□□ -0.17
CHD4-203ENST00000535717 APBA2Q99767 749 aa13.96□□□□□ -0.17
CHD4-203ENST00000535717 SLKQ9H2G2 1235 aaPredicted RBP13.96□□□□□ -0.17
CHD4-203ENST00000535717 SEC63Q9UGP8 760 aaKnown RBP13.96□□□□□ -0.17
CHD4-203ENST00000535717 OPLAHO14841 1288 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 PPFIA3O75145 1194 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 IFNAR1P17181 557 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 TRAF1Q13077 416 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 CCL14Q16627 93 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 ZNF792Q3KQV3 632 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 NSMFQ6X4W1 530 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 NECAB1Q8N987 351 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 TBC1D5Q92609 795 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 PHKBQ93100 1093 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 CYP39A1Q9NYL5 469 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 LIMCH1Q9UPQ0 1083 aa13.95□□□□□ -0.18
CHD4-203ENST00000535717 MRPL11Q9Y3B7 192 aaKnown RBP13.95□□□□□ -0.18
CHD4-203ENST00000535717 PFASO15067 1338 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 PRPF3O43395 683 aaKnown RBP13.94□□□□□ -0.18
CHD4-203ENST00000535717 ST18O60284 1047 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 GRK4P32298 578 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 CNTN2Q02246 1040 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 BAATQ14032 418 aaPredicted RBP13.94□□□□□ -0.18
CHD4-203ENST00000535717 SLC30A10Q6XR72 485 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 SLAIN1Q8ND83 568 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 RGS22Q8NE09 1264 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 PXYLP1Q8TE99 480 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 SH3TC2Q8TF17 1288 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 TRIB2Q92519 343 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 GTF3C6Q969F1 213 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 SLC5A4Q9NY91 659 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 FLRT1Q9NZU1 646 aa13.94□□□□□ -0.18
CHD4-203ENST00000535717 PTPDC1A2A3K4 754 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 POTEB2H3BUK9 544 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 CPLX1O14810 134 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 CD2BP2O95400 341 aaKnown RBP13.93□□□□□ -0.18
CHD4-203ENST00000535717 IGHA2P01877 340 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 RPS6P62753 249 aaKnown RBP13.93□□□□□ -0.18
CHD4-203ENST00000535717 PKN1Q16512 942 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 WWC2Q6AWC2 1192 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 RNF207Q6ZRF8 634 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 HEATR3Q7Z4Q2 680 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 MCF2L2Q86YR7 1114 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 TRMT44Q8IYL2 757 aaKnown RBP13.93□□□□□ -0.18
CHD4-203ENST00000535717 FAM133AQ8N9E0 248 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 IL27Q8NEV9 243 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 GPKOWQ92917 476 aaPredicted RBP eCLIP13.93□□□□□ -0.18
CHD4-203ENST00000535717 MAML3Q96JK9 1138 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 FGD4Q96M96 766 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 PURBQ96QR8 312 aaKnown RBP13.93□□□□□ -0.18
CHD4-203ENST00000535717 SLC26A6Q9BXS9 759 aa13.93□□□□□ -0.18
CHD4-203ENST00000535717 RNF26Q9BY78 433 aaPredicted RBP13.93□□□□□ -0.18
CHD4-203ENST00000535717 DIS3Q9Y2L1 958 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms