RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 RARBP10826 455 aa12.72□□□□□ -0.37
CCDC60-202ENST00000535685 CCDC178Q5BJE1 867 aa12.72□□□□□ -0.37
CCDC60-202ENST00000535685 DGKHQ86XP1 1220 aa12.72□□□□□ -0.37
CCDC60-202ENST00000535685 ANKRD35Q8N283 1001 aa12.72□□□□□ -0.37
CCDC60-202ENST00000535685 FAM133AQ8N9E0 248 aa12.72□□□□□ -0.37
CCDC60-202ENST00000535685 TMEM47Q9BQJ4 181 aa12.72□□□□□ -0.37
CCDC60-202ENST00000535685 TSEN34Q9BSV6 310 aaKnown RBP12.72□□□□□ -0.37
CCDC60-202ENST00000535685 ABHD16BQ9H3Z7 469 aa12.72□□□□□ -0.37
CCDC60-202ENST00000535685 PNMA2Q9UL42 364 aa12.72□□□□□ -0.37
CCDC60-202ENST00000535685 ZMYND8Q9ULU4 1186 aaPredicted RBP12.72□□□□□ -0.37
CCDC60-202ENST00000535685 PHF24Q9UPV7 400 aa12.72□□□□□ -0.37
CCDC60-202ENST00000535685 LTBP2Q14767 1821 aa12.72□□□□□ -0.37
CCDC60-202ENST00000535685 SZT2Q5T011 3432 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 LAMA3Q16787 3333 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 ZNF213O14771 459 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 TAL1P17542 331 aaPredicted RBP12.71□□□□□ -0.37
CCDC60-202ENST00000535685 MLLT3P42568 568 aaPredicted RBP12.71□□□□□ -0.37
CCDC60-202ENST00000535685 HAND2P61296 217 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 NKX3-2P78367 333 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 GJC2Q5T442 439 aaPredicted RBP12.71□□□□□ -0.37
CCDC60-202ENST00000535685 CWC27Q6UX04 472 aaKnown RBP12.71□□□□□ -0.37
CCDC60-202ENST00000535685 SLC39A5Q6ZMH5 540 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 KCTD1Q719H9 257 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 TBC1D10CQ8IV04 446 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 ANKS1AQ92625 1134 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 ESR2Q92731 530 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 RANBP17Q9H2T7 1088 aaKnown RBP12.71□□□□□ -0.37
CCDC60-202ENST00000535685 A1CFQ9NQ94 594 aaKnown RBP12.71□□□□□ -0.37
CCDC60-202ENST00000535685 XPNPEP3Q9NQH7 507 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 RNF146Q9NTX7 359 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 FAM184BQ9ULE4 1060 aa12.71□□□□□ -0.37
CCDC60-202ENST00000535685 RAD50Q92878 1312 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 LOC102724159A0A0B4J2E5 919 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 ADAMTS4O75173 837 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 DUSP11O75319 330 aaKnown RBP12.7□□□□□ -0.38
CCDC60-202ENST00000535685 ICAM1P05362 532 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 PDHBP11177 359 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 CST5P28325 142 aaPredicted RBP12.7□□□□□ -0.38
CCDC60-202ENST00000535685 MAGEA10P43363 369 aaPredicted RBP12.7□□□□□ -0.38
CCDC60-202ENST00000535685 RTP1P59025 263 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 ACVR2BQ13705 512 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 PWP2Q15269 919 aaKnown RBP12.7□□□□□ -0.38
CCDC60-202ENST00000535685 RRP12Q5JTH9 1297 aaKnown RBP12.7□□□□□ -0.38
CCDC60-202ENST00000535685 TTC22Q5TAA0 569 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 RNF180Q86T96 592 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 KLHDC9Q8NEP7 349 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 TRERF1Q96PN7 1200 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 KATNBL1Q9H079 304 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 TOMM22Q9NS69 142 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
CCDC60-202ENST00000535685 CTNNA3Q9UI47 895 aa12.7□□□□□ -0.38
CCDC60-202ENST00000535685 LRRC37A2A6NM11 1700 aa12.69□□□□□ -0.38
CCDC60-202ENST00000535685 C2orf72A6NCS6 295 aa12.69□□□□□ -0.38
CCDC60-202ENST00000535685 ASB14A6NK59 587 aa12.69□□□□□ -0.38
CCDC60-202ENST00000535685 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
CCDC60-202ENST00000535685 ZNF543Q08ER8 600 aa12.69□□□□□ -0.38
CCDC60-202ENST00000535685 IKQ13123 557 aaPredicted RBP12.69□□□□□ -0.38
CCDC60-202ENST00000535685 LRIT3Q3SXY7 679 aa12.69□□□□□ -0.38
CCDC60-202ENST00000535685 SYDE2Q5VT97 1194 aa12.69□□□□□ -0.38
CCDC60-202ENST00000535685 CCSAPQ6IQ19 270 aaPredicted RBP12.69□□□□□ -0.38
CCDC60-202ENST00000535685 ARMCX2Q7L311 632 aa12.69□□□□□ -0.38
CCDC60-202ENST00000535685 MORC4Q8TE76 937 aa12.69□□□□□ -0.38
CCDC60-202ENST00000535685 MAF1Q9H063 256 aa12.69□□□□□ -0.38
CCDC60-202ENST00000535685 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
CCDC60-202ENST00000535685 NEDD4P46934 1319 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 WDR19Q8NEZ3 1342 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 MOXD2PA6NHM9 499 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 ZMYND10O75800 440 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 ALAS1P13196 640 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 GSPT1P15170 499 aaKnown RBP12.68□□□□□ -0.38
CCDC60-202ENST00000535685 SYN1P17600 705 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 ADCYAP1R1P41586 468 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 IMMTQ16891 758 aaKnown RBP12.68□□□□□ -0.38
CCDC60-202ENST00000535685 TMEM132AQ24JP5 1023 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 CCDC96Q2M329 555 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
CCDC60-202ENST00000535685 TTBK2Q6IQ55 1244 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 RASGRP2Q7LDG7 609 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 IQCA1Q86XH1 822 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 PLPP6Q8IY26 295 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 CCDC144CPQ8IYA2 1237 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 TDHQ8IZJ6 230 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 CNNM2Q9H8M5 875 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 CYP39A1Q9NYL5 469 aa12.68□□□□□ -0.38
CCDC60-202ENST00000535685 BAZ2BQ9UIF8 2168 aaKnown RBP12.67□□□□□ -0.38
CCDC60-202ENST00000535685 SYNRGQ9UMZ2 1314 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 SOWAHBA6NEL2 793 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 GABBR2O75899 941 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 PGK1P00558 417 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 SLC4A3P48751 1232 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 GJA9P57773 515 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 CNTN2Q02246 1040 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 CCDC144BQ3MJ40 725 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 TOX2Q96NM4 488 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 KRT23Q9C075 422 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms