RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 WWC2Q6AWC2 1192 aa17.97■□□□□ 0.47
CNN1-202ENST00000535659 FAM184AQ8NB25 1140 aa17.97■□□□□ 0.47
CNN1-202ENST00000535659 SHCBP1Q8NEM2 672 aa17.97■□□□□ 0.47
CNN1-202ENST00000535659 GPKOWQ92917 476 aaPredicted RBP eCLIP17.97■□□□□ 0.47
CNN1-202ENST00000535659 MROH8Q9H579 483 aa17.97■□□□□ 0.47
CNN1-202ENST00000535659 FOXD4L1Q9NU39 408 aa17.97■□□□□ 0.47
CNN1-202ENST00000535659 BARHL2Q9NY43 387 aa17.97■□□□□ 0.47
CNN1-202ENST00000535659 MRPL11Q9Y3B7 192 aaKnown RBP17.97■□□□□ 0.47
CNN1-202ENST00000535659 ABCB11O95342 1321 aa17.96■□□□□ 0.47
CNN1-202ENST00000535659 TAL1P17542 331 aaPredicted RBP17.96■□□□□ 0.47
CNN1-202ENST00000535659 ERCC3P19447 782 aa17.96■□□□□ 0.47
CNN1-202ENST00000535659 GJB2P29033 226 aa17.96■□□□□ 0.47
CNN1-202ENST00000535659 COPB2P35606 906 aa17.96■□□□□ 0.47
CNN1-202ENST00000535659 NCAPG2Q86XI2 1143 aa17.96■□□□□ 0.47
CNN1-202ENST00000535659 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
CNN1-202ENST00000535659 CHST13Q8NET6 341 aa17.96■□□□□ 0.47
CNN1-202ENST00000535659 AIFM3Q96NN9 605 aa17.96■□□□□ 0.47
CNN1-202ENST00000535659 ALG1Q9BT22 464 aa17.96■□□□□ 0.47
CNN1-202ENST00000535659 SH3GLB2Q9NR46 395 aa17.96■□□□□ 0.47
CNN1-202ENST00000535659 STXBP3O00186 592 aa17.95■□□□□ 0.46
CNN1-202ENST00000535659 PORCNQ9H237 461 aa17.95■□□□□ 0.46
CNN1-202ENST00000535659 PRDM10Q9NQV6 1147 aa17.95■□□□□ 0.46
CNN1-202ENST00000535659 HOMER2Q9NSB8 354 aa17.95■□□□□ 0.46
CNN1-202ENST00000535659 RNF146Q9NTX7 359 aa17.95■□□□□ 0.46
CNN1-202ENST00000535659 FBXO40Q9UH90 709 aa17.95■□□□□ 0.46
CNN1-202ENST00000535659 KIF3AQ9Y496 699 aa17.95■□□□□ 0.46
CNN1-202ENST00000535659 COL11A1P12107 1806 aaPredicted RBP17.95■□□□□ 0.46
CNN1-202ENST00000535659 GPR25O00155 361 aa17.94■□□□□ 0.46
CNN1-202ENST00000535659 XBP1P17861 261 aa17.94■□□□□ 0.46
CNN1-202ENST00000535659 NAPAP54920 295 aa17.94■□□□□ 0.46
CNN1-202ENST00000535659 SP3Q02447 781 aa17.94■□□□□ 0.46
CNN1-202ENST00000535659 MUM1L1Q5H9M0 696 aa17.94■□□□□ 0.46
CNN1-202ENST00000535659 TYW1BQ6NUM6 668 aa17.94■□□□□ 0.46
CNN1-202ENST00000535659 SPRYD3Q8NCJ5 442 aa17.94■□□□□ 0.46
CNN1-202ENST00000535659 CCDC12Q8WUD4 166 aaPredicted RBP17.94■□□□□ 0.46
CNN1-202ENST00000535659 CLEC4DQ8WXI8 215 aa17.94■□□□□ 0.46
CNN1-202ENST00000535659 EFCC1Q9HA90 598 aa17.94■□□□□ 0.46
CNN1-202ENST00000535659 MAPK4P31152 587 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 NOM1Q5C9Z4 860 aaKnown RBP17.93■□□□□ 0.46
CNN1-202ENST00000535659 PPP1R18Q6NYC8 613 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 MCF2L2Q86YR7 1114 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 FAM177A1Q8N128 213 aaPredicted RBP17.93■□□□□ 0.46
CNN1-202ENST00000535659 RGS22Q8NE09 1264 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 ACAD9Q9H845 621 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 VPS54Q9P1Q0 977 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 SMCO2A6NFE2 343 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 STRNO43815 780 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 WDR78Q5VTH9 848 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 MAF1Q9H063 256 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 PSTPIP2Q9H939 334 aa17.93■□□□□ 0.46
CNN1-202ENST00000535659 DAXXQ9UER7 740 aaPredicted RBP17.93■□□□□ 0.46
CNN1-202ENST00000535659 NFIBO00712 420 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 OPLAHO14841 1288 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 MRPL12P52815 198 aaKnown RBP17.92■□□□□ 0.46
CNN1-202ENST00000535659 NLRP5P59047 1200 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 LACTBP83111 547 aaPredicted RBP17.92■□□□□ 0.46
CNN1-202ENST00000535659 TRIM29Q14134 588 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 LARP1BQ659C4 914 aaKnown RBP17.92■□□□□ 0.46
CNN1-202ENST00000535659 SAMD3Q8N6K7 520 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 CCDC148Q8NFR7 591 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 TBC1D5Q92609 795 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 SHISA4Q96DD7 197 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 C8orf76Q96K31 380 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 ZMYND12Q9H0C1 365 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
CNN1-202ENST00000535659 C6orf50Q9HD87 102 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 GJB4Q9NTQ9 266 aa17.92■□□□□ 0.46
CNN1-202ENST00000535659 ESYT2A0FGR8 921 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 FKTNO75072 461 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 FCER1AP12319 257 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 GNA11P29992 359 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 CTCFP49711 727 aaPredicted RBP17.91■□□□□ 0.46
CNN1-202ENST00000535659 KIF22Q14807 665 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.91■□□□□ 0.46
CNN1-202ENST00000535659 GPR142Q7Z601 462 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 PLEKHH3Q7Z736 793 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 ANKRD35Q8N283 1001 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 PHF20Q9BVI0 1012 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 GLT8D2Q9H1C3 349 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 RIC8AQ9NPQ8 531 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 MAP3K20Q9NYL2 800 aaKnown RBP17.91■□□□□ 0.46
CNN1-202ENST00000535659 TSKSQ9UJT2 592 aa17.91■□□□□ 0.46
CNN1-202ENST00000535659 CFBP00751 764 aa17.9■□□□□ 0.46
CNN1-202ENST00000535659 KRT40Q6A162 431 aa17.9■□□□□ 0.46
CNN1-202ENST00000535659 GALNT17Q6IS24 598 aa17.9■□□□□ 0.46
CNN1-202ENST00000535659 NSMFQ6X4W1 530 aa17.9■□□□□ 0.46
CNN1-202ENST00000535659 FBXO18Q8NFZ0 1043 aa17.9■□□□□ 0.46
CNN1-202ENST00000535659 CUL5Q93034 780 aa17.9■□□□□ 0.46
CNN1-202ENST00000535659 KCNJ14Q9UNX9 436 aa17.9■□□□□ 0.46
CNN1-202ENST00000535659 IVNS1ABPQ9Y6Y0 642 aa17.9■□□□□ 0.46
CNN1-202ENST00000535659 SMCHD1A6NHR9 2005 aa17.89■□□□□ 0.45
CNN1-202ENST00000535659 MYH6P13533 1939 aa17.89■□□□□ 0.45
CNN1-202ENST00000535659 GCOM1H8Y6P7 765 aaPredicted RBP17.89■□□□□ 0.45
CNN1-202ENST00000535659 ECM2O94769 699 aaPredicted RBP17.89■□□□□ 0.45
CNN1-202ENST00000535659 POLR2MP0CAP2 368 aa17.89■□□□□ 0.45
CNN1-202ENST00000535659 PDCP20941 246 aa17.89■□□□□ 0.45
CNN1-202ENST00000535659 PTPREP23469 700 aa17.89■□□□□ 0.45
CNN1-202ENST00000535659 CALML3P27482 149 aa17.89■□□□□ 0.45
CNN1-202ENST00000535659 PSMC4P43686 418 aa17.89■□□□□ 0.45
CNN1-202ENST00000535659 ADCY7P51828 1080 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms