RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TMEM265A0A087WTH1 108 aa15.56■□□□□ 0.08
CLSTN3-205ENST00000535452 LOC102724159A0A0B4J2E5 919 aa15.56■□□□□ 0.08
CLSTN3-205ENST00000535452 ARVCFO00192 962 aa15.56■□□□□ 0.08
CLSTN3-205ENST00000535452 FGAP02671 866 aa15.56■□□□□ 0.08
CLSTN3-205ENST00000535452 PWP2Q15269 919 aaKnown RBP15.56■□□□□ 0.08
CLSTN3-205ENST00000535452 FSCN1Q16658 493 aaKnown RBP15.56■□□□□ 0.08
CLSTN3-205ENST00000535452 PSRC1Q6PGN9 363 aaPredicted RBP15.56■□□□□ 0.08
CLSTN3-205ENST00000535452 KIAA1211Q6ZU35 1233 aa15.56■□□□□ 0.08
CLSTN3-205ENST00000535452 SH3RF1Q7Z6J0 888 aa15.56■□□□□ 0.08
CLSTN3-205ENST00000535452 GPCPD1Q9NPB8 672 aa15.56■□□□□ 0.08
CLSTN3-205ENST00000535452 ZMYM6O95789 1325 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 DYNC1LI2O43237 492 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 DHX16O60231 1041 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 NMT2O60551 498 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 HSPD1P10809 573 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 CNTN2Q02246 1040 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 PDE4DQ08499 809 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 NMIQ13287 307 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 C9orf50Q5SZB4 431 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 AKNAD1Q5T1N1 836 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 GPATCH4Q5T3I0 446 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 EEPD1Q7L9B9 569 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 UPF3AQ9H1J1 476 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 TCP11L1Q9NUJ3 509 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 CYP39A1Q9NYL5 469 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 CTNNA3Q9UI47 895 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 Q9Y3F1 56 aa15.55■□□□□ 0.08
CLSTN3-205ENST00000535452 FRMPD2Q68DX3 1309 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 FOSL2P15408 326 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 CPT1AP50416 773 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 HAND2P61296 217 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 FAAP100Q0VG06 881 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 IMMTQ16891 758 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 VPS53Q5VIR6 699 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 MFSD5Q6N075 450 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 RNF207Q6ZRF8 634 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 FAM227BQ96M60 508 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 TMEM47Q9BQJ4 181 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 KAT14Q9H8E8 782 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 IL17RBQ9NRM6 502 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 POLR3EQ9NVU0 708 aa15.54■□□□□ 0.08
CLSTN3-205ENST00000535452 A0A0D9SFI3 127 aa15.53■□□□□ 0.08
CLSTN3-205ENST00000535452 SUPT20HL2P0C7V6 817 aa15.53■□□□□ 0.08
CLSTN3-205ENST00000535452 CALML3P27482 149 aa15.53■□□□□ 0.08
CLSTN3-205ENST00000535452 SLC16A2P36021 539 aa15.53■□□□□ 0.08
CLSTN3-205ENST00000535452 SNAP25P60880 206 aa15.53■□□□□ 0.08
CLSTN3-205ENST00000535452 CHD1LQ86WJ1 897 aa15.53■□□□□ 0.08
CLSTN3-205ENST00000535452 FBXO16Q8IX29 292 aaPredicted RBP15.53■□□□□ 0.08
CLSTN3-205ENST00000535452 UBAC1Q9BSL1 405 aa15.53■□□□□ 0.08
CLSTN3-205ENST00000535452 PPP1R12CQ9BZL4 782 aa15.53■□□□□ 0.08
CLSTN3-205ENST00000535452 RANBP17Q9H2T7 1088 aaKnown RBP15.53■□□□□ 0.08
CLSTN3-205ENST00000535452 ZNF536O15090 1300 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 SALL3Q9BXA9 1300 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 SDSP20132 328 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 BEX3Q00994 111 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 TRDNQ13061 729 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 ITGA7Q13683 1181 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 BAATQ14032 418 aaPredicted RBP15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 PPP2R5BQ15173 497 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 CWC27Q6UX04 472 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 CXCL17Q6UXB2 119 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 RPUSD2Q8IZ73 545 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 KRT23Q9C075 422 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 SEMA6BQ9H3T3 888 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 CNNM2Q9H8M5 875 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 MSRAQ9UJ68 235 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 NOD1Q9Y239 953 aa15.52■□□□□ 0.08
CLSTN3-205ENST00000535452 MYADML2A6NDP7 307 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 SOWAHBA6NEL2 793 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 NKRFO15226 690 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 FGRP09769 529 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 MUM1L1Q5H9M0 696 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 CCSAPQ6IQ19 270 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 BTNL9Q6UXG8 535 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 DGKHQ86XP1 1220 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 MCF2L2Q86YR7 1114 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 MAFAQ8NHW3 353 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 GAS2L1Q99501 681 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 CDX2Q99626 313 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 WDR11Q9BZH6 1224 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 HIPK3Q9H422 1215 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 INCENPQ9NQS7 918 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 TBX21Q9UL17 535 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 LTBP2Q14767 1821 aa15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 RANBP2P49792 3224 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-205ENST00000535452 SMCHD1A6NHR9 2005 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 KPNA6O60684 536 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 PDHBP11177 359 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 SMPD1P17405 629 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 ALDH5A1P51649 535 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 ZNF543Q08ER8 600 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 TRAF1Q13077 416 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 FAM47CQ5HY64 1035 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 FAM126BQ8IXS8 530 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 DNERQ8NFT8 737 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 OR6J1Q8NGC5 347 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 SCFD2Q8WU76 684 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms