RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 GJA9P57773 515 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 CCDC178Q5BJE1 867 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 SH3RF1Q7Z6J0 888 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 IQCA1Q86XH1 822 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 BADQ92934 168 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 TRIM43Q96BQ3 446 aaPredicted RBP19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 GLT1D1Q96MS3 346 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 DSCC1Q9BVC3 393 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 KATNBL1Q9H079 304 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 CTNNA3Q9UI47 895 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 MYADML2A6NDP7 307 aa19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 ADCY6O43306 1168 aa19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 TNFAIP2Q03169 654 aa19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 ZNF543Q08ER8 600 aa19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 IMMTQ16891 758 aaKnown RBP19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 GNASQ5JWF2 1037 aa19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 CCSAPQ6IQ19 270 aaPredicted RBP19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 DGKHQ86XP1 1220 aa19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 DEFB123Q8N688 67 aa19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 VTI1AQ96AJ9 217 aa19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 TOX2Q96NM4 488 aa19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 ZKSCAN3Q9BRR0 538 aa19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 UPF3AQ9H1J1 476 aaKnown RBP19.01■□□□□ 0.63
CLSTN3-204ENST00000535313 ELP1O95163 1332 aa19■□□□□ 0.63
CLSTN3-204ENST00000535313 DCDC2CA8MYV0 355 aa19■□□□□ 0.63
CLSTN3-204ENST00000535313 KDM4AO75164 1064 aa19■□□□□ 0.63
CLSTN3-204ENST00000535313 ASGR1P07306 291 aa19■□□□□ 0.63
CLSTN3-204ENST00000535313 ANKRD33Q7Z3H0 272 aa19■□□□□ 0.63
CLSTN3-204ENST00000535313 TMEM39AQ9NV64 488 aa19■□□□□ 0.63
CLSTN3-204ENST00000535313 ADD3Q9UEY8 706 aaKnown RBP19■□□□□ 0.63
CLSTN3-204ENST00000535313 LTBP2Q14767 1821 aa19■□□□□ 0.63
CLSTN3-204ENST00000535313 SNHG28P0DPA3 235 aa18.99■□□□□ 0.63
CLSTN3-204ENST00000535313 BAATQ14032 418 aaPredicted RBP18.99■□□□□ 0.63
CLSTN3-204ENST00000535313 GPATCH4Q5T3I0 446 aaKnown RBP18.99■□□□□ 0.63
CLSTN3-204ENST00000535313 KAT14Q9H8E8 782 aa18.99■□□□□ 0.63
CLSTN3-204ENST00000535313 MROH7Q68CQ1 1323 aa18.99■□□□□ 0.63
CLSTN3-204ENST00000535313 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 PTPDC1A2A3K4 754 aa18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 B4E1Z4 1266 aa18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 KIAA0355O15063 1070 aa18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 RAG1P15918 1043 aa18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 IRX5P78411 483 aaPredicted RBP18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 Q7L0L9 218 aa18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 EEPD1Q7L9B9 569 aa18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 KRT23Q9C075 422 aa18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 AP5M1Q9H0R1 490 aa18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 ASTN1O14525 1302 aa18.98■□□□□ 0.63
CLSTN3-204ENST00000535313 A0A0U1RQG5 324 aaPredicted RBP18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 NFIBO00712 420 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 NKX3-2P78367 333 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 FAAP100Q0VG06 881 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 SHHQ15465 462 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 TTC22Q5TAA0 569 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 IQSEC1Q6DN90 963 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 TLK2Q86UE8 772 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 FBXO16Q8IX29 292 aaPredicted RBP18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 PNMA1Q8ND90 353 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 PURBQ96QR8 312 aaKnown RBP18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 ZSCAN10Q96SZ4 725 aaPredicted RBP18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 CNNM2Q9H8M5 875 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 VTA1Q9NP79 307 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 GNEQ9Y223 722 aaKnown RBP18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 DDX49Q9Y6V7 483 aaKnown RBP18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 WDR19Q8NEZ3 1342 aa18.97■□□□□ 0.63
CLSTN3-204ENST00000535313 LAMA4Q16363 1823 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 LOC102724159A0A0B4J2E5 919 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 ZEB2O60315 1214 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 GOLGA8HP0CJ92 632 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 SMPD1P17405 629 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 CALML3P27482 149 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 PDE4AP27815 886 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 BEX3Q00994 111 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 PWP2Q15269 919 aaKnown RBP18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 C9orf50Q5SZB4 431 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 RNF207Q6ZRF8 634 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 MORC4Q8TE76 937 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 ANKS1AQ92625 1134 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 PDGFCQ9NRA1 345 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 ZSWIM5Q9P217 1185 aa18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 LAMA2P24043 3122 aaKnown RBP18.96■□□□□ 0.63
CLSTN3-204ENST00000535313 ARVCFO00192 962 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 CTAGE5O15320 804 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 DYNC1LI2O43237 492 aaPredicted RBP18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 GSPT1P15170 499 aaKnown RBP18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 ITGB8P26012 769 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 ALDH5A1P51649 535 aaPredicted RBP18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 IRX6P78412 446 aaPredicted RBP18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 FSCN1Q16658 493 aaKnown RBP18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 TAPT1Q6NXT6 567 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 KIAA1211Q6ZU35 1233 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 RUFY2Q8WXA3 655 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 CLEC4DQ8WXI8 215 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 MPHOSPH6Q99547 160 aaKnown RBP18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 UBAC1Q9BSL1 405 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 UBA5Q9GZZ9 404 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 Q9Y3F1 56 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 RAD50Q92878 1312 aa18.95■□□□□ 0.62
CLSTN3-204ENST00000535313 TLR3O15455 904 aaKnown RBP18.94■□□□□ 0.62
CLSTN3-204ENST00000535313 CABYRO75952 493 aa18.94■□□□□ 0.62
CLSTN3-204ENST00000535313 CDK7P50613 346 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms