RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 LNPKQ9C0E8 428 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ALDH8A1Q9H2A2 487 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-201ENST00000535076 TAOK3Q9H2K8 898 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 KIF9Q9HAQ2 790 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ATP6V0A4Q9HBG4 840 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ZNF304Q9HCX3 659 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 TCF7L2Q9NQB0 619 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 FHOD1Q9Y613 1164 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ERICH3Q5RHP9 1530 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 POLA1P09884 1462 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 PPIP5K1Q6PFW1 1433 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 TMEM94Q12767 1356 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 CCDC162PA2VCL2 907 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 EME2A4GXA9 379 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 CYTH3O43739 400 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 XYLBO75191 536 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 ATP6V1G1O75348 118 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 ZNF189O75820 626 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 EGFRP00533 1210 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 LDHCP07864 332 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 RPSAP08865 295 aaKnown RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 TROVE2P10155 538 aaKnown RBP eCLIP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 RARAP10276 462 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 EPB42P16452 691 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 ITGB7P26010 798 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 CCT6AP40227 531 aaKnown RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 NUCB1Q02818 461 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 CUL4BQ13620 913 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 MYBPC3Q14896 1274 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 INAQ16352 499 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 ALDH1L2Q3SY69 923 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 HFE2Q6ZVN8 426 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 IQCA1Q86XH1 822 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 CMTR1Q8N1G2 835 aaKnown RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 THEMISQ8N1K5 641 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 CCDC112Q8NEF3 446 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 NEK11Q8NG66 645 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 PPP1R14CQ8TAE6 165 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 EXOC6Q8TAG9 804 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 TRPM4Q8TD43 1214 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 C8orf76Q96K31 380 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 NEUROD6Q96NK8 337 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 RPS6KC1Q96S38 1066 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 OSBPL10Q9BXB5 764 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 UPF3BQ9BZI7 483 aaKnown RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 SLC7A5P2Q9GIP4 190 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 PDGFDQ9GZP0 370 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 SYNCQ9H7C4 482 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 JPH1Q9HDC5 661 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 GABBR1Q9UBS5 961 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 CIDEBQ9UHD4 219 aa5.85□□□□□ -1.47
SNHG1-201ENST00000535076 PAIP2BQ9ULR5 123 aaKnown RBP5.85□□□□□ -1.47
SNHG1-201ENST00000535076 SBNO2Q9Y2G9 1366 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 IQCA1LA6NCM1 817 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 PIK3R2O00459 728 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 DIAPH2O60879 1101 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 MMP20O60882 483 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 LILRB5O75023 590 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 ADAM23O75077 832 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 FURINP09958 794 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 PNMA6AP0CW24 399 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-201ENST00000535076 SPATA31C1P0DKV0 1188 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 IL4RP24394 825 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 MATR3P43243 847 aaKnown RBP eCLIP5.84□□□□□ -1.47
SNHG1-201ENST00000535076 RANBP1P43487 201 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 AMPHP49418 695 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 GPLD1P80108 840 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 BTG3Q14201 252 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-201ENST00000535076 GRIK4Q16099 956 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 TRIM71Q2Q1W2 868 aaKnown RBP5.84□□□□□ -1.47
SNHG1-201ENST00000535076 COL13A1Q5TAT6 717 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-201ENST00000535076 CREB3L3Q68CJ9 461 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 NXNQ6DKJ4 435 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 TLDC1Q6P9B6 456 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 NOP9Q86U38 636 aaKnown RBP5.84□□□□□ -1.47
SNHG1-201ENST00000535076 FAM35AQ86V20 835 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 KIAA0825Q8IV33 1275 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 REXO1L1PQ8IX06 675 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 GALNT15Q8N3T1 639 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 ARL10Q8N8L6 244 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 SMARCE1Q969G3 411 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 HOOK2Q96ED9 719 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 ZNF512BQ96KM6 892 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-201ENST00000535076 ACBD3Q9H3P7 528 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 CASS4Q9NQ75 786 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 KRT82Q9NSB4 513 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 IFT57Q9NWB7 429 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 KIAA1522Q9P206 1035 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-201ENST00000535076 TUBGCP4Q9UGJ1 667 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 CORO1CQ9ULV4 474 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-201ENST00000535076 CARD8Q9Y2G2 431 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 WDR97A6NE52 1622 aa5.84□□□□□ -1.47
SNHG1-201ENST00000535076 ZMYM4Q5VZL5 1548 aa5.84□□□□□ -1.48
SNHG1-201ENST00000535076 A0A0A0MRY4 1105 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 J3QW42 95 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 MGEA5O60502 916 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 NEMFO60524 1076 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 CD9P21926 228 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 MAGEA10P43363 369 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-201ENST00000535076 MECOMQ03112 1051 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms