RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
ATM-224ENST00000534625 AP4E1Q9UPM8 1137 aa6.8□□□□□ -1.32
ATM-224ENST00000534625 NIP7Q9Y221 180 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATM-224ENST00000534625 ZNF652Q9Y2D9 606 aa6.8□□□□□ -1.32
ATM-224ENST00000534625 LEMD3Q9Y2U8 911 aa6.8□□□□□ -1.32
ATM-224ENST00000534625 DICER1Q9UPY3 1922 aaKnown RBP6.8□□□□□ -1.32
ATM-224ENST00000534625 SYNGAP1Q96PV0 1343 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 LTBP3Q9NS15 1303 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.79□□□□□ -1.32
ATM-224ENST00000534625 FAM170BA6NMN3 283 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 ERVV-1B6SEH8 477 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 DYNC1LI2O43237 492 aaPredicted RBP6.79□□□□□ -1.32
ATM-224ENST00000534625 ZNF862O60290 1169 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 VEGFAP15692 232 aaPredicted RBP6.79□□□□□ -1.32
ATM-224ENST00000534625 NPR1P16066 1061 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 LIG1P18858 919 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 RAB6AP20340 208 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 HTRA3P83110 453 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 RALBP1Q15311 655 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 HP1BP3Q5SSJ5 553 aaPredicted RBP6.79□□□□□ -1.32
ATM-224ENST00000534625 TPTE2Q6XPS3 522 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 NFXL1Q6ZNB6 911 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 NGEFQ8N5V2 710 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 TBC1D32Q96NH3 1257 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 YIPF2Q9BWQ6 316 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 KRTAP4-2Q9BYR5 136 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 PNNQ9H307 717 aaKnown RBP6.79□□□□□ -1.32
ATM-224ENST00000534625 C1GALT1Q9NS00 363 aa6.79□□□□□ -1.32
ATM-224ENST00000534625 RRP7AQ9Y3A4 280 aaKnown RBP6.79□□□□□ -1.32
ATM-224ENST00000534625 MAP3K15Q6ZN16 1313 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 TNRC6CQ9HCJ0 1690 aaKnown RBP6.78□□□□□ -1.32
ATM-224ENST00000534625 KDM3BQ7LBC6 1761 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 TMPRSS2O15393 492 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 TREHO43280 583 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 ASPAP45381 313 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 FCGRTP55899 365 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 RIPK4P57078 832 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 DDX10Q13206 875 aaKnown RBP6.78□□□□□ -1.32
ATM-224ENST00000534625 PDE3AQ14432 1141 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 CPSF6Q16630 551 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATM-224ENST00000534625 SOGA3Q5TF21 947 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 OLFM4Q6UX06 510 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 LRP10Q7Z4F1 713 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 SMC1BQ8NDV3 1235 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 GIMAP7Q8NHV1 300 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 BCO2Q9BYV7 579 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 ZC3H12CQ9C0D7 883 aaKnown RBP6.78□□□□□ -1.32
ATM-224ENST00000534625 TAOK3Q9H2K8 898 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 BIN2Q9UBW5 565 aaPredicted RBP6.78□□□□□ -1.32
ATM-224ENST00000534625 ANGEL1Q9UNK9 670 aaKnown RBP6.78□□□□□ -1.32
ATM-224ENST00000534625 PCDHGC5Q9Y5F6 944 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 NUP98P52948 1817 aa6.78□□□□□ -1.32
ATM-224ENST00000534625 MAPK8IP3Q9UPT6 1336 aa6.77□□□□□ -1.32
ATM-224ENST00000534625 CACNA1SQ13698 1873 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 DDNO94850 711 aaPredicted RBP6.77□□□□□ -1.33
ATM-224ENST00000534625 MYL6BP14649 208 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 TMPOP42166 694 aaKnown RBP6.77□□□□□ -1.33
ATM-224ENST00000534625 MAP7Q14244 749 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 ENOX2Q16206 610 aaKnown RBP6.77□□□□□ -1.33
ATM-224ENST00000534625 CCDC93Q567U6 631 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 CBLL1Q75N03 491 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 PDZD3Q86UT5 571 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 ZNF34Q8IZ26 560 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 POU5F2Q8N7G0 328 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 STK35Q8TDR2 534 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 CRIM1Q9NZV1 1036 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 CCDC39Q9UFE4 941 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 TSPYL4Q9UJ04 414 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 LAMB4A4D0S4 1761 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 ARFGEF2Q9Y6D5 1785 aa6.77□□□□□ -1.33
ATM-224ENST00000534625 UBN2Q6ZU65 1347 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 TIAM2Q8IVF5 1701 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 WDR90Q96KV7 1748 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 PNMA6FA0A0J9YX94 578 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 PRNPP04156 253 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 GPTP24298 496 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 ALDH1B1P30837 517 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 PLCB3Q01970 1234 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 PROSER3Q2NL68 480 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 CRY2Q49AN0 593 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.76□□□□□ -1.33
ATM-224ENST00000534625 SUSD4Q5VX71 490 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 NXPE4Q6UWF7 544 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 DTHD1Q6ZMT9 781 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 KIF6Q6ZMV9 814 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 JMYQ8N9B5 988 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 ASIC4Q96FT7 647 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 METTL22Q9BUU2 404 aaPredicted RBP6.76□□□□□ -1.33
ATM-224ENST00000534625 NYXQ9GZU5 481 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 ZNF277Q9NRM2 450 aaPredicted RBP6.76□□□□□ -1.33
ATM-224ENST00000534625 BABAM1Q9NWV8 329 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 ABCC12Q96J65 1359 aa6.76□□□□□ -1.33
ATM-224ENST00000534625 MYBBP1AQ9BQG0 1328 aaKnown RBP6.76□□□□□ -1.33
ATM-224ENST00000534625 CYP26A1O43174 497 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 NTSR2O95665 410 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 ANXA1P04083 346 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 GSTP1P09211 210 aaKnown RBP6.75□□□□□ -1.33
ATM-224ENST00000534625 EIF2S2P20042 333 aaKnown RBP6.75□□□□□ -1.33
ATM-224ENST00000534625 MAPK1P28482 360 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms