RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 COPB2P35606 906 aa16.3■□□□□ 0.2
VPS11-205ENST00000534551 KCTD2Q14681 263 aa16.3■□□□□ 0.2
VPS11-205ENST00000534551 RTN1Q16799 776 aa16.3■□□□□ 0.2
VPS11-205ENST00000534551 NSMFQ6X4W1 530 aa16.3■□□□□ 0.2
VPS11-205ENST00000534551 TMTC3Q6ZXV5 915 aa16.3■□□□□ 0.2
VPS11-205ENST00000534551 NOL8Q76FK4 1167 aaKnown RBP16.3■□□□□ 0.2
VPS11-205ENST00000534551 DPP9Q86TI2 863 aa16.3■□□□□ 0.2
VPS11-205ENST00000534551 CHST13Q8NET6 341 aa16.3■□□□□ 0.2
VPS11-205ENST00000534551 TM6SF1Q9BZW5 370 aa16.3■□□□□ 0.2
VPS11-205ENST00000534551 RIOX1Q9H6W3 641 aa16.3■□□□□ 0.2
VPS11-205ENST00000534551 FAM217BQ9NTX9 383 aaPredicted RBP16.3■□□□□ 0.2
VPS11-205ENST00000534551 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
VPS11-205ENST00000534551 DNAJC25-GNG10A0A024R161 153 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 DTNBO60941 627 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 HMGCRP04035 888 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 HOXC6P09630 235 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 KIF5BP33176 963 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 CYP2C19P33261 490 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 ANAPC15P60006 121 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 ABRAQ8N0Z2 381 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 TMTC2Q8N394 836 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 FANCBQ8NB91 859 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 MAP3K14Q99558 947 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 KIF2CQ99661 725 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 UNC93B1Q9H1C4 597 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 NCOA5Q9HCD5 579 aaKnown RBP16.29■□□□□ 0.2
VPS11-205ENST00000534551 PDRG1Q9NUG6 133 aa16.29■□□□□ 0.2
VPS11-205ENST00000534551 NID2Q14112 1375 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 POTEFA5A3E0 1075 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 STRNO43815 780 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 CALM1P0DP23 149 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 CALM2P0DP24 149 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 CALM3P0DP25 149 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 XRCC5P13010 732 aaKnown RBP16.28■□□□□ 0.2
VPS11-205ENST00000534551 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
VPS11-205ENST00000534551 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.2
VPS11-205ENST00000534551 CNTN2Q02246 1040 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 ZNF792Q3KQV3 632 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.28■□□□□ 0.2
VPS11-205ENST00000534551 FBXO11Q86XK2 927 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 ANKRD35Q8N283 1001 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 PXYLP1Q8TE99 480 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 IL17RAQ96F46 866 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 MAML3Q96JK9 1138 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 SPZ1Q9BXG8 430 aa16.28■□□□□ 0.2
VPS11-205ENST00000534551 OPLAHO14841 1288 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 ZBTB5O15062 677 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 CCL5P13501 91 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 CCT2P78371 535 aaKnown RBP16.27■□□□□ 0.2
VPS11-205ENST00000534551 TKFCQ3LXA3 575 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 SYNE3Q6ZMZ3 975 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 TRPV1Q8NER1 839 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 TBC1D5Q92609 795 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 DDX11Q96FC9 970 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 C22orf23Q9BZE7 217 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 CYP39A1Q9NYL5 469 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 FBXO40Q9UH90 709 aa16.27■□□□□ 0.2
VPS11-205ENST00000534551 ABCB11O95342 1321 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 PTPDC1A2A3K4 754 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 LARGE1O95461 756 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 IGHA2P01877 340 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 CCND3P30281 292 aaPredicted RBP16.26■□□□□ 0.19
VPS11-205ENST00000534551 ADD1P35611 737 aaKnown RBP16.26■□□□□ 0.19
VPS11-205ENST00000534551 AK2P54819 239 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 CACNB2Q08289 660 aaPredicted RBP16.26■□□□□ 0.19
VPS11-205ENST00000534551 FUT2Q10981 343 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 STK3Q13188 491 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 BAATQ14032 418 aaPredicted RBP16.26■□□□□ 0.19
VPS11-205ENST00000534551 PRAMEF19Q5SWL8 479 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 FBXL16Q8N461 479 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 FAM133AQ8N9E0 248 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 GPKOWQ92917 476 aaPredicted RBP eCLIP16.26■□□□□ 0.19
VPS11-205ENST00000534551 COL20A1Q9P218 1284 aa16.26■□□□□ 0.19
VPS11-205ENST00000534551 KIAA1217Q5T5P2 1943 aa16.25■□□□□ 0.19
VPS11-205ENST00000534551 CALML3P27482 149 aa16.25■□□□□ 0.19
VPS11-205ENST00000534551 PDIA3P30101 505 aaKnown RBP16.25■□□□□ 0.19
VPS11-205ENST00000534551 GNAQP50148 359 aa16.25■□□□□ 0.19
VPS11-205ENST00000534551 RPS6P62753 249 aaKnown RBP16.25■□□□□ 0.19
VPS11-205ENST00000534551 MAP3K21Q5TCX8 1036 aa16.25■□□□□ 0.19
VPS11-205ENST00000534551 AMNQ9BXJ7 453 aa16.25■□□□□ 0.19
VPS11-205ENST00000534551 RBM28Q9NW13 759 aaKnown RBP16.25■□□□□ 0.19
VPS11-205ENST00000534551 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
VPS11-205ENST00000534551 PFASO15067 1338 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 PNMA6FA0A0J9YX94 578 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 POTEB2H3BUK9 544 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 CYBAP13498 195 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 NEK4P51957 841 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 UBXN2AP68543 259 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 ANO1Q5XXA6 986 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 OLFML2BQ68BL8 750 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 RNF207Q6ZRF8 634 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 PHKBQ93100 1093 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 LENG1Q96BZ8 264 aaPredicted RBP16.24■□□□□ 0.19
VPS11-205ENST00000534551 SHISA4Q96DD7 197 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 RRP36Q96EU6 259 aaKnown RBP16.24■□□□□ 0.19
VPS11-205ENST00000534551 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.24■□□□□ 0.19
VPS11-205ENST00000534551 RNF208Q9H0X6 261 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 PCDHA1Q9Y5I3 950 aa16.24■□□□□ 0.19
VPS11-205ENST00000534551 DOCK5Q9H7D0 1870 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms