RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 ABCB11O95342 1321 aa28.04■■■□□ 2.08
SIPA1-210ENST00000534406 CNTNAP5Q8WYK1 1306 aa28.04■■■□□ 2.08
SIPA1-210ENST00000534406 XRCC5P13010 732 aaKnown RBP28.04■■■□□ 2.08
SIPA1-210ENST00000534406 PDIA3P30101 505 aaKnown RBP28.04■■■□□ 2.08
SIPA1-210ENST00000534406 AK2P54819 239 aa28.04■■■□□ 2.08
SIPA1-210ENST00000534406 TNS4Q8IZW8 715 aa28.04■■■□□ 2.08
SIPA1-210ENST00000534406 CMTR1Q8N1G2 835 aaKnown RBP28.04■■■□□ 2.08
SIPA1-210ENST00000534406 AMNQ9BXJ7 453 aa28.04■■■□□ 2.08
SIPA1-210ENST00000534406 SEC63Q9UGP8 760 aaKnown RBP28.04■■■□□ 2.08
SIPA1-210ENST00000534406 PLXNA1Q9UIW2 1896 aa28.04■■■□□ 2.08
SIPA1-210ENST00000534406 ADCY3O60266 1144 aa28.03■■■□□ 2.08
SIPA1-210ENST00000534406 HOXC6P09630 235 aa28.03■■■□□ 2.08
SIPA1-210ENST00000534406 CDC27P30260 824 aa28.03■■■□□ 2.08
SIPA1-210ENST00000534406 SLC9C1Q4G0N8 1177 aa28.03■■■□□ 2.08
SIPA1-210ENST00000534406 MUM1L1Q5H9M0 696 aa28.03■■■□□ 2.08
SIPA1-210ENST00000534406 DPP9Q86TI2 863 aa28.03■■■□□ 2.08
SIPA1-210ENST00000534406 ANKRD35Q8N283 1001 aa28.03■■■□□ 2.08
SIPA1-210ENST00000534406 PIBF1Q8WXW3 757 aa28.03■■■□□ 2.08
SIPA1-210ENST00000534406 ZNF274Q96GC6 653 aaPredicted RBP28.03■■■□□ 2.08
SIPA1-210ENST00000534406 LARP6Q9BRS8 491 aaKnown RBP28.03■■■□□ 2.08
SIPA1-210ENST00000534406 FAM217BQ9NTX9 383 aaPredicted RBP28.03■■■□□ 2.08
SIPA1-210ENST00000534406 CENPFP49454 3210 aa28.02■■■□□ 2.08
SIPA1-210ENST00000534406 PFASO15067 1338 aa28.02■■■□□ 2.08
SIPA1-210ENST00000534406 PNMA6FA0A0J9YX94 578 aa28.02■■■□□ 2.08
SIPA1-210ENST00000534406 GRK4P32298 578 aa28.02■■■□□ 2.08
SIPA1-210ENST00000534406 TRAF1Q13077 416 aa28.02■■■□□ 2.08
SIPA1-210ENST00000534406 CCDC82Q8N4S0 544 aa28.02■■■□□ 2.08
SIPA1-210ENST00000534406 A1CFQ9NQ94 594 aaKnown RBP28.02■■■□□ 2.08
SIPA1-210ENST00000534406 SLC5A4Q9NY91 659 aa28.02■■■□□ 2.08
SIPA1-210ENST00000534406 PPP1R11O60927 126 aaPredicted RBP28.01■■■□□ 2.07
SIPA1-210ENST00000534406 PXYLP1Q8TE99 480 aa28.01■■■□□ 2.07
SIPA1-210ENST00000534406 DDX11Q96FC9 970 aa28.01■■■□□ 2.07
SIPA1-210ENST00000534406 NFIBO00712 420 aa28■■■□□ 2.07
SIPA1-210ENST00000534406 COBLO75128 1261 aa28■■■□□ 2.07
SIPA1-210ENST00000534406 PGK2P07205 417 aa28■■■□□ 2.07
SIPA1-210ENST00000534406 ELNP15502 786 aa28■■■□□ 2.07
SIPA1-210ENST00000534406 RABEP1Q15276 862 aa28■■■□□ 2.07
SIPA1-210ENST00000534406 NSMFQ6X4W1 530 aa28■■■□□ 2.07
SIPA1-210ENST00000534406 TRMT44Q8IYL2 757 aaKnown RBP28■■■□□ 2.07
SIPA1-210ENST00000534406 CLEC4DQ8WXI8 215 aa28■■■□□ 2.07
SIPA1-210ENST00000534406 MRPL11Q9Y3B7 192 aaKnown RBP28■■■□□ 2.07
SIPA1-210ENST00000534406 ADD1P35611 737 aaKnown RBP27.99■■■□□ 2.07
SIPA1-210ENST00000534406 CCT2P78371 535 aaKnown RBP27.99■■■□□ 2.07
SIPA1-210ENST00000534406 NOL8Q76FK4 1167 aaKnown RBP27.99■■■□□ 2.07
SIPA1-210ENST00000534406 SH3TC2Q8TF17 1288 aa27.99■■■□□ 2.07
SIPA1-210ENST00000534406 NCOA5Q9HCD5 579 aaKnown RBP27.99■■■□□ 2.07
SIPA1-210ENST00000534406 TPCN1Q9ULQ1 816 aa27.99■■■□□ 2.07
SIPA1-210ENST00000534406 PCDHA1Q9Y5I3 950 aa27.99■■■□□ 2.07
SIPA1-210ENST00000534406 DNAJC25-GNG10A0A024R161 153 aa27.98■■■□□ 2.07
SIPA1-210ENST00000534406 HMGCRP04035 888 aa27.98■■■□□ 2.07
SIPA1-210ENST00000534406 FUT2Q10981 343 aa27.98■■■□□ 2.07
SIPA1-210ENST00000534406 STK3Q13188 491 aa27.98■■■□□ 2.07
SIPA1-210ENST00000534406 NPLOC4Q8TAT6 608 aa27.98■■■□□ 2.07
SIPA1-210ENST00000534406 TRIB2Q92519 343 aa27.98■■■□□ 2.07
SIPA1-210ENST00000534406 ARMC5Q96C12 935 aa27.98■■■□□ 2.07
SIPA1-210ENST00000534406 CYP39A1Q9NYL5 469 aa27.98■■■□□ 2.07
SIPA1-210ENST00000534406 LCTP09848 1927 aa27.97■■■□□ 2.07
SIPA1-210ENST00000534406 CCL14Q16627 93 aa27.97■■■□□ 2.07
SIPA1-210ENST00000534406 ZNF792Q3KQV3 632 aa27.97■■■□□ 2.07
SIPA1-210ENST00000534406 SLKQ9H2G2 1235 aaPredicted RBP27.97■■■□□ 2.07
SIPA1-210ENST00000534406 BIN2Q9UBW5 565 aaPredicted RBP27.97■■■□□ 2.07
SIPA1-210ENST00000534406 DIS3Q9Y2L1 958 aaKnown RBP27.97■■■□□ 2.07
SIPA1-210ENST00000534406 MCF2L2Q86YR7 1114 aa27.96■■■□□ 2.07
SIPA1-210ENST00000534406 hCG_1642624A0A1W2PR95 340 aa27.95■■■□□ 2.06
SIPA1-210ENST00000534406 PTPDC1A2A3K4 754 aa27.95■■■□□ 2.06
SIPA1-210ENST00000534406 POTEB2H3BUK9 544 aa27.95■■■□□ 2.06
SIPA1-210ENST00000534406 CPLX1O14810 134 aa27.95■■■□□ 2.06
SIPA1-210ENST00000534406 INHAP05111 366 aa27.95■■■□□ 2.06
SIPA1-210ENST00000534406 OLFML2BQ68BL8 750 aa27.95■■■□□ 2.06
SIPA1-210ENST00000534406 RNF207Q6ZRF8 634 aa27.95■■■□□ 2.06
SIPA1-210ENST00000534406 ABHD8Q96I13 439 aa27.95■■■□□ 2.06
SIPA1-210ENST00000534406 MAML3Q96JK9 1138 aa27.95■■■□□ 2.06
SIPA1-210ENST00000534406 MAF1Q9H063 256 aa27.95■■■□□ 2.06
SIPA1-210ENST00000534406 RBM27Q9P2N5 1060 aaKnown RBP27.95■■■□□ 2.06
SIPA1-210ENST00000534406 PFKFB2O60825 505 aa27.94■■■□□ 2.06
SIPA1-210ENST00000534406 UBXN2AP68543 259 aa27.94■■■□□ 2.06
SIPA1-210ENST00000534406 BAATQ14032 418 aaPredicted RBP27.94■■■□□ 2.06
SIPA1-210ENST00000534406 CPLX2Q6PUV4 134 aaKnown RBP27.94■■■□□ 2.06
SIPA1-210ENST00000534406 SLC30A10Q6XR72 485 aa27.94■■■□□ 2.06
SIPA1-210ENST00000534406 FAM133AQ8N9E0 248 aa27.94■■■□□ 2.06
SIPA1-210ENST00000534406 RGS22Q8NE09 1264 aa27.94■■■□□ 2.06
SIPA1-210ENST00000534406 IL27Q8NEV9 243 aa27.94■■■□□ 2.06
SIPA1-210ENST00000534406 ZNF333Q96JL9 665 aa27.94■■■□□ 2.06
SIPA1-210ENST00000534406 FLRT1Q9NZU1 646 aa27.94■■■□□ 2.06
SIPA1-210ENST00000534406 ST18O60284 1047 aa27.93■■■□□ 2.06
SIPA1-210ENST00000534406 IFNAR1P17181 557 aa27.93■■■□□ 2.06
SIPA1-210ENST00000534406 NTRK3Q16288 839 aa27.93■■■□□ 2.06
SIPA1-210ENST00000534406 MFSD14CQ5VZR4 134 aa27.93■■■□□ 2.06
SIPA1-210ENST00000534406 HEATR3Q7Z4Q2 680 aa27.93■■■□□ 2.06
SIPA1-210ENST00000534406 V9GY48 417 aaPredicted RBP27.93■■■□□ 2.06
SIPA1-210ENST00000534406 LARGE1O95461 756 aa27.92■■■□□ 2.06
SIPA1-210ENST00000534406 RPS6P62753 249 aaKnown RBP27.92■■■□□ 2.06
SIPA1-210ENST00000534406 AKAP17AQ02040 695 aaKnown RBP27.92■■■□□ 2.06
SIPA1-210ENST00000534406 SCRN1Q12765 414 aa27.92■■■□□ 2.06
SIPA1-210ENST00000534406 ZNF467Q7Z7K2 595 aaPredicted RBP27.92■■■□□ 2.06
SIPA1-210ENST00000534406 OPLAHO14841 1288 aa27.91■■■□□ 2.06
SIPA1-210ENST00000534406 CALML3P27482 149 aa27.91■■■□□ 2.06
SIPA1-210ENST00000534406 CNTN2Q02246 1040 aa27.91■■■□□ 2.06
SIPA1-210ENST00000534406 ME3Q16798 604 aa27.91■■■□□ 2.06
SIPA1-210ENST00000534406 GPKOWQ92917 476 aaPredicted RBP eCLIP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms