RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 TOX2Q96NM4 488 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 KRT23Q9C075 422 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 MAF1Q9H063 256 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 UPF3AQ9H1J1 476 aaKnown RBP15.73■□□□□ 0.11
CAPN1-228ENST00000534373 CNNM2Q9H8M5 875 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 GPCPD1Q9NPB8 672 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 ELP1O95163 1332 aa15.72■□□□□ 0.11
CAPN1-228ENST00000534373 NEDD4P46934 1319 aa15.72■□□□□ 0.11
CAPN1-228ENST00000534373 RAD50Q92878 1312 aa15.72■□□□□ 0.11
CAPN1-228ENST00000534373 SOX1O00570 391 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-228ENST00000534373 KDM4AO75164 1064 aa15.72■□□□□ 0.11
CAPN1-228ENST00000534373 SNAP25P60880 206 aa15.72■□□□□ 0.11
CAPN1-228ENST00000534373 KCNA10Q16322 511 aa15.72■□□□□ 0.11
CAPN1-228ENST00000534373 MORC4Q8TE76 937 aa15.72■□□□□ 0.11
CAPN1-228ENST00000534373 ZSCAN10Q96SZ4 725 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-228ENST00000534373 STARD7Q9NQZ5 370 aa15.72■□□□□ 0.11
CAPN1-228ENST00000534373 ZSWIM5Q9P217 1185 aa15.72■□□□□ 0.11
CAPN1-228ENST00000534373 ADD3Q9UEY8 706 aaKnown RBP15.72■□□□□ 0.11
CAPN1-228ENST00000534373 FRMPD2Q68DX3 1309 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-228ENST00000534373 WDR19Q8NEZ3 1342 aa15.71■□□□□ 0.11
CAPN1-228ENST00000534373 C6orf222P0C671 652 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-228ENST00000534373 TNFAIP2Q03169 654 aa15.71■□□□□ 0.11
CAPN1-228ENST00000534373 TLE2Q04725 743 aa15.71■□□□□ 0.11
CAPN1-228ENST00000534373 IQSEC1Q6DN90 963 aa15.71■□□□□ 0.11
CAPN1-228ENST00000534373 NSMFQ6X4W1 530 aa15.71■□□□□ 0.11
CAPN1-228ENST00000534373 ANKRD33Q7Z3H0 272 aa15.71■□□□□ 0.11
CAPN1-228ENST00000534373 PNMA1Q8ND90 353 aa15.71■□□□□ 0.11
CAPN1-228ENST00000534373 LENG1Q96BZ8 264 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-228ENST00000534373 GLT1D1Q96MS3 346 aa15.71■□□□□ 0.11
CAPN1-228ENST00000534373 PDLIM7Q9NR12 457 aa15.71■□□□□ 0.11
CAPN1-228ENST00000534373 Q9Y3F1 56 aa15.71■□□□□ 0.11
CAPN1-228ENST00000534373 B4E1Z4 1266 aa15.7■□□□□ 0.1
CAPN1-228ENST00000534373 GSPT1P15170 499 aaKnown RBP15.7■□□□□ 0.1
CAPN1-228ENST00000534373 BAATQ14032 418 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-228ENST00000534373 GNASQ5JWF2 1037 aa15.7■□□□□ 0.1
CAPN1-228ENST00000534373 RGS22Q8NE09 1264 aa15.7■□□□□ 0.1
CAPN1-228ENST00000534373 LRCH3Q96II8 777 aa15.7■□□□□ 0.1
CAPN1-228ENST00000534373 ZKSCAN3Q9BRR0 538 aa15.7■□□□□ 0.1
CAPN1-228ENST00000534373 KAT14Q9H8E8 782 aa15.7■□□□□ 0.1
CAPN1-228ENST00000534373 VTA1Q9NP79 307 aa15.7■□□□□ 0.1
CAPN1-228ENST00000534373 MROH7Q68CQ1 1323 aa15.69■□□□□ 0.1
CAPN1-228ENST00000534373 DCDC2CA8MYV0 355 aa15.69■□□□□ 0.1
CAPN1-228ENST00000534373 KIAA0355O15063 1070 aa15.69■□□□□ 0.1
CAPN1-228ENST00000534373 ADCY6O43306 1168 aa15.69■□□□□ 0.1
CAPN1-228ENST00000534373 ASGR1P07306 291 aa15.69■□□□□ 0.1
CAPN1-228ENST00000534373 CLTBP09497 229 aa15.69■□□□□ 0.1
CAPN1-228ENST00000534373 CLEC4DQ8WXI8 215 aa15.69■□□□□ 0.1
CAPN1-228ENST00000534373 SEZ6LQ9BYH1 1024 aa15.69■□□□□ 0.1
CAPN1-228ENST00000534373 PRDM5Q9NQX1 630 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-228ENST00000534373 GNEQ9Y223 722 aaKnown RBP15.69■□□□□ 0.1
CAPN1-228ENST00000534373 ASTN1O14525 1302 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 TRIM43BA6NCK2 446 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 NFIBO00712 420 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 CABYRO75952 493 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 CHMLP26374 656 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 CDK7P50613 346 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 ASPRV1Q53RT3 343 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 TAPT1Q6NXT6 567 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 RNF207Q6ZRF8 634 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 ENAHQ8N8S7 591 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-228ENST00000534373 DNERQ8NFT8 737 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 TRIM43Q96BQ3 446 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-228ENST00000534373 MPHOSPH6Q99547 160 aaKnown RBP15.68■□□□□ 0.1
CAPN1-228ENST00000534373 UBAC1Q9BSL1 405 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 AP5M1Q9H0R1 490 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 U3KPZ7 1027 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-228ENST00000534373 LAMA4Q16363 1823 aa15.68■□□□□ 0.1
CAPN1-228ENST00000534373 MCM3APO60318 1980 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 PTPDC1A2A3K4 754 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 MYADML2A6NDP7 307 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 B4DLN1 442 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 CTAGE5O15320 804 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 ZEB2O60315 1214 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 PQBP1O60828 265 aaKnown RBP15.67■□□□□ 0.1
CAPN1-228ENST00000534373 ALDH5A1P51649 535 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-228ENST00000534373 MRPL12P52815 198 aaKnown RBP15.67■□□□□ 0.1
CAPN1-228ENST00000534373 FAAP100Q0VG06 881 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 TRDNQ13061 729 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 NOL8Q76FK4 1167 aaKnown RBP15.67■□□□□ 0.1
CAPN1-228ENST00000534373 SH3RF1Q7Z6J0 888 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 BADQ92934 168 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 IL25Q9H293 177 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 TMEM39AQ9NV64 488 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 TNKSO95271 1327 aa15.67■□□□□ 0.1
CAPN1-228ENST00000534373 A0A0U1RQG5 324 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-228ENST00000534373 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-228ENST00000534373 ARVCFO00192 962 aa15.66■□□□□ 0.1
CAPN1-228ENST00000534373 PARP1P09874 1014 aaKnown RBP15.66■□□□□ 0.1
CAPN1-228ENST00000534373 GOLGA8HP0CJ92 632 aa15.66■□□□□ 0.1
CAPN1-228ENST00000534373 RAG1P15918 1043 aa15.66■□□□□ 0.1
CAPN1-228ENST00000534373 SMPD1P17405 629 aa15.66■□□□□ 0.1
CAPN1-228ENST00000534373 RPS6P62753 249 aaKnown RBP15.66■□□□□ 0.1
CAPN1-228ENST00000534373 IRX6P78412 446 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-228ENST00000534373 IFIT1BQ5T764 474 aaKnown RBP15.66■□□□□ 0.1
CAPN1-228ENST00000534373 FAM109BQ6ICB4 259 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-228ENST00000534373 KIAA1211Q6ZU35 1233 aa15.66■□□□□ 0.1
CAPN1-228ENST00000534373 TLK2Q86UE8 772 aa15.66■□□□□ 0.1
CAPN1-228ENST00000534373 ADGRF4Q8IZF3 695 aa15.66■□□□□ 0.1
CAPN1-228ENST00000534373 VTI1AQ96AJ9 217 aa15.66■□□□□ 0.1
CAPN1-228ENST00000534373 UBA5Q9GZZ9 404 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms