RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 SKILP12757 684 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 STAT6P42226 847 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 ADCY7P51828 1080 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 CCZ1BP86790 482 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 CCZ1P86791 482 aaPredicted RBP13.51□□□□□ -0.25
CLP1-205ENST00000533682 ICA1Q05084 483 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 ABCB5Q2M3G0 1257 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 SPICE1Q8N0Z3 855 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 SUPT20HQ8NEM7 779 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 KANSL2Q9H9L4 492 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 MYH7BA7E2Y1 1941 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 A0A1W2PRG0 241 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 PPP1R3GB7ZBB8 358 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 F5H6K3 240 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 UBA7P41226 1012 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 TXKP42681 527 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 TNNI2P48788 182 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 KLRC3Q07444 240 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 TRIML1Q8N9V2 468 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 GSDMAQ96QA5 445 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 GMLQ99445 158 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 ARID3AQ99856 593 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 PPP1R1BQ9UD71 204 aaPredicted RBP13.5□□□□□ -0.25
CLP1-205ENST00000533682 USP17L15C9J2P7 530 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 USP17L13C9JLJ4 530 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 USP17L11C9JVI0 530 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 USP17L18D6R9N7 530 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 USP17L22D6RA61 530 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 USP17L17D6RBQ6 530 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 USP17L19D6RCP7 530 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 USP17L20D6RJB6 530 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 ZBTB5O15062 677 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 VIL1P09327 827 aaKnown RBP13.5□□□□□ -0.25
CLP1-205ENST00000533682 OR52Z1P0C646 297 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 ZNF18P17022 549 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 USP17L24Q0WX57 530 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 GPATCH4Q5T3I0 446 aaKnown RBP13.5□□□□□ -0.25
CLP1-205ENST00000533682 USP17L6PQ6QN14 398 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 RTKN2Q8IZC4 609 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 ENOX1Q8TC92 643 aaKnown RBP13.5□□□□□ -0.25
CLP1-205ENST00000533682 MKL1Q969V6 931 aa13.5□□□□□ -0.25
CLP1-205ENST00000533682 ESYT2A0FGR8 921 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 KIF20AO95235 890 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 CDK11BP21127 795 aaKnown RBP13.49□□□□□ -0.25
CLP1-205ENST00000533682 ECE1P42892 770 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 QRICH1Q2TAL8 776 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 RRAGBQ5VZM2 374 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 VEZTQ9HBM0 779 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 NYAP2Q9P242 653 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 GDAQ9Y2T3 454 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 DHX8Q14562 1220 aaKnown RBP13.49□□□□□ -0.25
CLP1-205ENST00000533682 MIGA2Q7L4E1 593 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 C16orf45Q96MC5 204 aaPredicted RBP13.49□□□□□ -0.25
CLP1-205ENST00000533682 PSMD1Q99460 953 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 TMEM39BQ9GZU3 492 aa13.49□□□□□ -0.25
CLP1-205ENST00000533682 NDUFB10O96000 172 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 PLCG1P19174 1290 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 TXLNAP40222 546 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 DLGAP5Q15398 846 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 KIAA1755Q5JYT7 1200 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 MTMR8Q96EF0 704 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 CCDC34Q96HJ3 373 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 P2RX7Q99572 595 aaKnown RBP13.48□□□□□ -0.25
CLP1-205ENST00000533682 MMTAG2Q9BU76 263 aaKnown RBP13.48□□□□□ -0.25
CLP1-205ENST00000533682 GTPBP4Q9BZE4 634 aaKnown RBP13.48□□□□□ -0.25
CLP1-205ENST00000533682 PSTPIP2Q9H939 334 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 RIC8AQ9NPQ8 531 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 TRMT1Q9NXH9 659 aaKnown RBP13.48□□□□□ -0.25
CLP1-205ENST00000533682 ZNF70Q9UC06 446 aaPredicted RBP13.48□□□□□ -0.25
CLP1-205ENST00000533682 GTPBP6O43824 516 aaPredicted RBP13.48□□□□□ -0.25
CLP1-205ENST00000533682 ENTPD3O75355 529 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 NPM3O75607 178 aaKnown RBP13.48□□□□□ -0.25
CLP1-205ENST00000533682 RPN1P04843 607 aaKnown RBP13.48□□□□□ -0.25
CLP1-205ENST00000533682 PPP4R3BQ5MIZ7 849 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 CABP7Q86V35 215 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 OGFOD1Q8N543 542 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 ACER1Q8TDN7 264 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 MTMR9Q96QG7 549 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLP1-205ENST00000533682 DACH1Q9UI36 760 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 CTNND2Q9UQB3 1225 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 PCDHA1Q9Y5I3 950 aa13.48□□□□□ -0.25
CLP1-205ENST00000533682 ATRNL1Q5VV63 1379 aa13.47□□□□□ -0.25
CLP1-205ENST00000533682 POTEMA6NI47 508 aa13.47□□□□□ -0.25
CLP1-205ENST00000533682 ERCC5P28715 1186 aaPredicted RBP13.47□□□□□ -0.25
CLP1-205ENST00000533682 PRPHP41219 470 aa13.47□□□□□ -0.25
CLP1-205ENST00000533682 CLK2P49760 499 aaKnown RBP13.47□□□□□ -0.25
CLP1-205ENST00000533682 CXCL9Q07325 125 aa13.47□□□□□ -0.25
CLP1-205ENST00000533682 IKQ13123 557 aaPredicted RBP13.47□□□□□ -0.25
CLP1-205ENST00000533682 CDC37Q16543 378 aaPredicted RBP13.47□□□□□ -0.25
CLP1-205ENST00000533682 NBPF9Q3BBW0 867 aa13.47□□□□□ -0.25
CLP1-205ENST00000533682 USH1GQ495M9 461 aa13.47□□□□□ -0.25
CLP1-205ENST00000533682 RBM26Q5T8P6 1007 aaKnown RBP13.47□□□□□ -0.25
CLP1-205ENST00000533682 NUDT12Q9BQG2 462 aa13.47□□□□□ -0.25
CLP1-205ENST00000533682 CCSER1Q9C0I3 900 aa13.47□□□□□ -0.25
CLP1-205ENST00000533682 PSME4Q14997 1843 aa13.47□□□□□ -0.25
CLP1-205ENST00000533682 CNTNAP1P78357 1384 aa13.47□□□□□ -0.25
CLP1-205ENST00000533682 LAD1O00515 517 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms