RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 LHX8Q68G74 356 aa23.83■■□□□ 1.4
CCS-208ENST00000533244 USP26Q9BXU7 913 aa23.83■■□□□ 1.4
CCS-208ENST00000533244 LRRC2Q9BYS8 371 aa23.83■■□□□ 1.4
CCS-208ENST00000533244 RIOX1Q9H6W3 641 aa23.83■■□□□ 1.4
CCS-208ENST00000533244 SYNGAP1Q96PV0 1343 aa23.82■■□□□ 1.4
CCS-208ENST00000533244 NFIBO00712 420 aa23.82■■□□□ 1.4
CCS-208ENST00000533244 HMGB1P09429 215 aaKnown RBP23.82■■□□□ 1.4
CCS-208ENST00000533244 QRICH1Q2TAL8 776 aa23.82■■□□□ 1.4
CCS-208ENST00000533244 OGDHLQ9ULD0 1010 aa23.82■■□□□ 1.4
CCS-208ENST00000533244 POTEB2H3BUK9 544 aa23.81■■□□□ 1.4
CCS-208ENST00000533244 CNTN2Q02246 1040 aa23.81■■□□□ 1.4
CCS-208ENST00000533244 MYL10Q9BUA6 226 aa23.81■■□□□ 1.4
CCS-208ENST00000533244 MYH6P13533 1939 aa23.81■■□□□ 1.4
CCS-208ENST00000533244 CCDC69A6NI79 296 aa23.8■■□□□ 1.4
CCS-208ENST00000533244 CYTH3O43739 400 aa23.8■■□□□ 1.4
CCS-208ENST00000533244 TFRCP02786 760 aaKnown RBP23.8■■□□□ 1.4
CCS-208ENST00000533244 ANKLE1Q8NAG6 615 aa23.8■■□□□ 1.4
CCS-208ENST00000533244 NUP133Q8WUM0 1156 aa23.8■■□□□ 1.4
CCS-208ENST00000533244 DDX20Q9UHI6 824 aaKnown RBP23.8■■□□□ 1.4
CCS-208ENST00000533244 ASTN1O14525 1302 aa23.8■■□□□ 1.4
CCS-208ENST00000533244 SOWAHBA6NEL2 793 aa23.79■■□□□ 1.4
CCS-208ENST00000533244 DHX16O60231 1041 aaKnown RBP23.79■■□□□ 1.4
CCS-208ENST00000533244 MSCO60682 206 aa23.79■■□□□ 1.4
CCS-208ENST00000533244 SNAI1O95863 264 aaPredicted RBP23.79■■□□□ 1.4
CCS-208ENST00000533244 PRAMEF19Q5SWL8 479 aa23.79■■□□□ 1.4
CCS-208ENST00000533244 NSMFQ6X4W1 530 aa23.79■■□□□ 1.4
CCS-208ENST00000533244 NFXL1Q6ZNB6 911 aa23.79■■□□□ 1.4
CCS-208ENST00000533244 TCEANC2Q96MN5 208 aa23.79■■□□□ 1.4
CCS-208ENST00000533244 MAF1Q9H063 256 aa23.79■■□□□ 1.4
CCS-208ENST00000533244 VAT1LQ9HCJ6 419 aa23.79■■□□□ 1.4
CCS-208ENST00000533244 ABCB11O95342 1321 aa23.79■■□□□ 1.4
CCS-208ENST00000533244 ZBTB5O15062 677 aa23.78■■□□□ 1.4
CCS-208ENST00000533244 SEPT4O43236 478 aa23.78■■□□□ 1.4
CCS-208ENST00000533244 CALM1P0DP23 149 aa23.78■■□□□ 1.4
CCS-208ENST00000533244 CALM2P0DP24 149 aa23.78■■□□□ 1.4
CCS-208ENST00000533244 CALM3P0DP25 149 aa23.78■■□□□ 1.4
CCS-208ENST00000533244 KIF5BP33176 963 aa23.78■■□□□ 1.4
CCS-208ENST00000533244 MNX1P50219 401 aaPredicted RBP23.78■■□□□ 1.4
CCS-208ENST00000533244 USH1GQ495M9 461 aa23.78■■□□□ 1.4
CCS-208ENST00000533244 FBXO11Q86XK2 927 aa23.78■■□□□ 1.4
CCS-208ENST00000533244 RGS22Q8NE09 1264 aa23.78■■□□□ 1.4
CCS-208ENST00000533244 CTCFLQ8NI51 663 aaPredicted RBP23.78■■□□□ 1.4
CCS-208ENST00000533244 JAKMIP1Q96N16 626 aaKnown RBP23.78■■□□□ 1.4
CCS-208ENST00000533244 MCM3APO60318 1980 aa23.77■■□□□ 1.4
CCS-208ENST00000533244 PPP1R11O60927 126 aaPredicted RBP23.77■■□□□ 1.4
CCS-208ENST00000533244 FARP2O94887 1054 aaPredicted RBP23.77■■□□□ 1.4
CCS-208ENST00000533244 ZNF865P0CJ78 1059 aaPredicted RBP23.77■■□□□ 1.4
CCS-208ENST00000533244 SMARCA1P28370 1054 aa23.77■■□□□ 1.4
CCS-208ENST00000533244 BAATQ14032 418 aaPredicted RBP23.77■■□□□ 1.4
CCS-208ENST00000533244 SPZ1Q9BXG8 430 aa23.77■■□□□ 1.4
CCS-208ENST00000533244 SLC12A7Q9Y666 1083 aa23.77■■□□□ 1.4
CCS-208ENST00000533244 PDE4DIPQ5VU43 2346 aa23.77■■□□□ 1.4
CCS-208ENST00000533244 BAZ2BQ9UIF8 2168 aaKnown RBP23.77■■□□□ 1.39
CCS-208ENST00000533244 CPA1P15085 419 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 CNGA1P29973 690 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 APOA5Q6Q788 366 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 SLC30A10Q6XR72 485 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 FBXL16Q8N461 479 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 AMNQ9BXJ7 453 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.76■■□□□ 1.39
CCS-208ENST00000533244 LRRC37A2A6NM11 1700 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 GNAQP50148 359 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 BLOC1S2Q6QNY1 142 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 RNF207Q6ZRF8 634 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 ARMCX2Q7L311 632 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 PIGSQ96S52 555 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 LZTS2Q9BRK4 669 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 KATNBL1Q9H079 304 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 CNPY2Q9Y2B0 182 aa23.76■■□□□ 1.39
CCS-208ENST00000533244 RXRAP19793 462 aa23.75■■□□□ 1.39
CCS-208ENST00000533244 RPS6KB1P23443 525 aa23.75■■□□□ 1.39
CCS-208ENST00000533244 PSMA5P28066 241 aa23.75■■□□□ 1.39
CCS-208ENST00000533244 RPS6P62753 249 aaKnown RBP23.75■■□□□ 1.39
CCS-208ENST00000533244 GHRHRQ02643 423 aa23.75■■□□□ 1.39
CCS-208ENST00000533244 CCDC144CPQ8IYA2 1237 aa23.75■■□□□ 1.39
CCS-208ENST00000533244 MORC4Q8TE76 937 aa23.75■■□□□ 1.39
CCS-208ENST00000533244 PURBQ96QR8 312 aaKnown RBP23.75■■□□□ 1.39
CCS-208ENST00000533244 AGXT2Q9BYV1 514 aa23.75■■□□□ 1.39
CCS-208ENST00000533244 BRPF3Q9ULD4 1205 aa23.75■■□□□ 1.39
CCS-208ENST00000533244 MRPL11Q9Y3B7 192 aaKnown RBP23.75■■□□□ 1.39
CCS-208ENST00000533244 LOC102724159A0A0B4J2E5 919 aa23.74■■□□□ 1.39
CCS-208ENST00000533244 PNMA6FA0A0J9YX94 578 aa23.74■■□□□ 1.39
CCS-208ENST00000533244 PTPDC1A2A3K4 754 aa23.74■■□□□ 1.39
CCS-208ENST00000533244 ASB14A6NK59 587 aa23.74■■□□□ 1.39
CCS-208ENST00000533244 OPLAHO14841 1288 aa23.74■■□□□ 1.39
CCS-208ENST00000533244 PLEKHA8P1O95397 391 aa23.74■■□□□ 1.39
CCS-208ENST00000533244 PWP2Q15269 919 aaKnown RBP23.74■■□□□ 1.39
CCS-208ENST00000533244 HOMER1Q86YM7 354 aa23.74■■□□□ 1.39
CCS-208ENST00000533244 SRBD1Q8N5C6 995 aaKnown RBP23.74■■□□□ 1.39
CCS-208ENST00000533244 FANCBQ8NB91 859 aa23.74■■□□□ 1.39
CCS-208ENST00000533244 ABHD16BQ9H3Z7 469 aa23.74■■□□□ 1.39
CCS-208ENST00000533244 RCAN1P53805 252 aa23.73■■□□□ 1.39
CCS-208ENST00000533244 ACVR2BQ13705 512 aa23.73■■□□□ 1.39
CCS-208ENST00000533244 MICU3Q86XE3 530 aa23.73■■□□□ 1.39
CCS-208ENST00000533244 DIS3LQ8TF46 1054 aaKnown RBP23.73■■□□□ 1.39
CCS-208ENST00000533244 TM6SF1Q9BZW5 370 aa23.73■■□□□ 1.39
CCS-208ENST00000533244 ADD3Q9UEY8 706 aaKnown RBP23.73■■□□□ 1.39
CCS-208ENST00000533244 AKR1A1P14550 325 aa23.72■■□□□ 1.39
CCS-208ENST00000533244 CASTP20810 708 aaKnown RBP23.72■■□□□ 1.39
CCS-208ENST00000533244 CALML3P27482 149 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms