RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CENPFP49454 3210 aa13.92□□□□□ -0.18
SSBP3-214ENST00000533209 GOLGA8AA7E2F4 631 aa13.92□□□□□ -0.18
SSBP3-214ENST00000533209 GOLGA8BA8MQT2 603 aa13.92□□□□□ -0.18
SSBP3-214ENST00000533209 NFIBO00712 420 aa13.92□□□□□ -0.18
SSBP3-214ENST00000533209 HMGCRP04035 888 aa13.92□□□□□ -0.18
SSBP3-214ENST00000533209 RTN1Q16799 776 aa13.92□□□□□ -0.18
SSBP3-214ENST00000533209 USH1GQ495M9 461 aa13.92□□□□□ -0.18
SSBP3-214ENST00000533209 FBXO11Q86XK2 927 aa13.92□□□□□ -0.18
SSBP3-214ENST00000533209 TRMT44Q8IYL2 757 aaKnown RBP13.92□□□□□ -0.18
SSBP3-214ENST00000533209 CMTR1Q8N1G2 835 aaKnown RBP13.92□□□□□ -0.18
SSBP3-214ENST00000533209 ANKRD35Q8N283 1001 aa13.92□□□□□ -0.18
SSBP3-214ENST00000533209 C22orf23Q9BZE7 217 aa13.92□□□□□ -0.18
SSBP3-214ENST00000533209 ALDH8A1Q9H2A2 487 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-214ENST00000533209 BIN2Q9UBW5 565 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-214ENST00000533209 NAP1L2Q9ULW6 460 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-214ENST00000533209 PNMA6FA0A0J9YX94 578 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 INHAP05111 366 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 CDC27P30260 824 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 RBM25P49756 843 aaKnown RBP13.91□□□□□ -0.18
SSBP3-214ENST00000533209 FUT2Q10981 343 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 TRIM32Q13049 653 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 HOMER1Q86YM7 354 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 DDX11Q96FC9 970 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 MAML3Q96JK9 1138 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 FGD4Q96M96 766 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 KIF2CQ99661 725 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 LARP6Q9BRS8 491 aaKnown RBP13.91□□□□□ -0.18
SSBP3-214ENST00000533209 AMNQ9BXJ7 453 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 RBM28Q9NW13 759 aaKnown RBP13.91□□□□□ -0.18
SSBP3-214ENST00000533209 SLC5A4Q9NY91 659 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 DIS3Q9Y2L1 958 aaKnown RBP13.91□□□□□ -0.18
SSBP3-214ENST00000533209 NID2Q14112 1375 aa13.91□□□□□ -0.18
SSBP3-214ENST00000533209 PFASO15067 1338 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 ABCB11O95342 1321 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 PDIA3P30101 505 aaKnown RBP13.9□□□□□ -0.18
SSBP3-214ENST00000533209 METAP2P50579 478 aaKnown RBP eCLIP13.9□□□□□ -0.18
SSBP3-214ENST00000533209 PPP2R5BQ15173 497 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 MTFR1Q15390 333 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 MAP3K21Q5TCX8 1036 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 OLFML2BQ68BL8 750 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 NSMFQ6X4W1 530 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 PIBF1Q8WXW3 757 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 RRP36Q96EU6 259 aaKnown RBP13.9□□□□□ -0.18
SSBP3-214ENST00000533209 BACH2Q9BYV9 841 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 CYP39A1Q9NYL5 469 aa13.9□□□□□ -0.18
SSBP3-214ENST00000533209 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.19
SSBP3-214ENST00000533209 MYCP01106 439 aaPredicted RBP13.89□□□□□ -0.19
SSBP3-214ENST00000533209 ADD1P35611 737 aaKnown RBP13.89□□□□□ -0.19
SSBP3-214ENST00000533209 NEK4P51957 841 aa13.89□□□□□ -0.19
SSBP3-214ENST00000533209 AK2P54819 239 aa13.89□□□□□ -0.19
SSBP3-214ENST00000533209 UBXN2AP68543 259 aa13.89□□□□□ -0.19
SSBP3-214ENST00000533209 CNTN2Q02246 1040 aa13.89□□□□□ -0.19
SSBP3-214ENST00000533209 CACNB2Q08289 660 aaPredicted RBP13.89□□□□□ -0.19
SSBP3-214ENST00000533209 BAATQ14032 418 aaPredicted RBP13.89□□□□□ -0.19
SSBP3-214ENST00000533209 FAM133AQ8N9E0 248 aa13.89□□□□□ -0.19
SSBP3-214ENST00000533209 RGS22Q8NE09 1264 aa13.89□□□□□ -0.19
SSBP3-214ENST00000533209 ZNF274Q96GC6 653 aaPredicted RBP13.89□□□□□ -0.19
SSBP3-214ENST00000533209 MRPL11Q9Y3B7 192 aaKnown RBP13.89□□□□□ -0.19
SSBP3-214ENST00000533209 PCDHA1Q9Y5I3 950 aa13.89□□□□□ -0.19
SSBP3-214ENST00000533209 SMCHD1A6NHR9 2005 aa13.89□□□□□ -0.19
SSBP3-214ENST00000533209 BAZ2BQ9UIF8 2168 aaKnown RBP13.88□□□□□ -0.19
SSBP3-214ENST00000533209 CCDC196A0A1B0GTZ2 297 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 hCG_1642624A0A1W2PR95 340 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 PTPDC1A2A3K4 754 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 SOWAHBA6NEL2 793 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 CCDC85CA6NKD9 419 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 POTEB2H3BUK9 544 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 OPLAHO14841 1288 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 CCL5P13501 91 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
SSBP3-214ENST00000533209 CYP2C19P33261 490 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 MFSD14CQ5VZR4 134 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 SLC30A10Q6XR72 485 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 ZNF467Q7Z7K2 595 aaPredicted RBP13.88□□□□□ -0.19
SSBP3-214ENST00000533209 TBC1D5Q92609 795 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 PURBQ96QR8 312 aaKnown RBP13.88□□□□□ -0.19
SSBP3-214ENST00000533209 UNC93B1Q9H1C4 597 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 UPF2Q9HAU5 1272 aaKnown RBP13.88□□□□□ -0.19
SSBP3-214ENST00000533209 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
SSBP3-214ENST00000533209 TPCN1Q9ULQ1 816 aa13.88□□□□□ -0.19
SSBP3-214ENST00000533209 RPS6P62753 249 aaKnown RBP13.87□□□□□ -0.19
SSBP3-214ENST00000533209 CCT2P78371 535 aaKnown RBP13.87□□□□□ -0.19
SSBP3-214ENST00000533209 TRAF1Q13077 416 aa13.87□□□□□ -0.19
SSBP3-214ENST00000533209 ANKRD1Q15327 319 aa13.87□□□□□ -0.19
SSBP3-214ENST00000533209 NTRK3Q16288 839 aa13.87□□□□□ -0.19
SSBP3-214ENST00000533209 MAMDC4Q6UXC1 1216 aa13.87□□□□□ -0.19
SSBP3-214ENST00000533209 RNF207Q6ZRF8 634 aa13.87□□□□□ -0.19
SSBP3-214ENST00000533209 TBC1D32Q96NH3 1257 aa13.87□□□□□ -0.19
SSBP3-214ENST00000533209 TINF2Q9BSI4 451 aa13.87□□□□□ -0.19
SSBP3-214ENST00000533209 MAF1Q9H063 256 aa13.87□□□□□ -0.19
SSBP3-214ENST00000533209 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
SSBP3-214ENST00000533209 V9GY48 417 aaPredicted RBP13.87□□□□□ -0.19
SSBP3-214ENST00000533209 ASTN1O14525 1302 aa13.87□□□□□ -0.19
SSBP3-214ENST00000533209 RPTORQ8N122 1335 aa13.87□□□□□ -0.19
SSBP3-214ENST00000533209 CYBAP13498 195 aa13.86□□□□□ -0.19
SSBP3-214ENST00000533209 CALML3P27482 149 aa13.86□□□□□ -0.19
SSBP3-214ENST00000533209 GHRHRQ02643 423 aa13.86□□□□□ -0.19
SSBP3-214ENST00000533209 STK3Q13188 491 aa13.86□□□□□ -0.19
SSBP3-214ENST00000533209 MCF2L2Q86YR7 1114 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms