RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 FBXO11Q86XK2 927 aa17.32■□□□□ 0.36
PUF60-221ENST00000533162 ARRDC4Q8NCT1 418 aa17.32■□□□□ 0.36
PUF60-221ENST00000533162 NUP133Q8WUM0 1156 aa17.32■□□□□ 0.36
PUF60-221ENST00000533162 LY9Q9HBG7 655 aa17.32■□□□□ 0.36
PUF60-221ENST00000533162 CYP39A1Q9NYL5 469 aa17.32■□□□□ 0.36
PUF60-221ENST00000533162 MAD2L2Q9UI95 211 aa17.32■□□□□ 0.36
PUF60-221ENST00000533162 MRPL11Q9Y3B7 192 aaKnown RBP17.32■□□□□ 0.36
PUF60-221ENST00000533162 SLC12A7Q9Y666 1083 aa17.32■□□□□ 0.36
PUF60-221ENST00000533162 RBBP6Q7Z6E9 1792 aaKnown RBP17.32■□□□□ 0.36
PUF60-221ENST00000533162 LOC102724159A0A0B4J2E5 919 aa17.31■□□□□ 0.36
PUF60-221ENST00000533162 RARBP10826 455 aa17.31■□□□□ 0.36
PUF60-221ENST00000533162 PSMA5P28066 241 aa17.31■□□□□ 0.36
PUF60-221ENST00000533162 PWP2Q15269 919 aaKnown RBP17.31■□□□□ 0.36
PUF60-221ENST00000533162 USH1GQ495M9 461 aa17.31■□□□□ 0.36
PUF60-221ENST00000533162 ZNF654Q8IZM8 581 aa17.31■□□□□ 0.36
PUF60-221ENST00000533162 RGS22Q8NE09 1264 aa17.31■□□□□ 0.36
PUF60-221ENST00000533162 DPF3Q92784 378 aa17.31■□□□□ 0.36
PUF60-221ENST00000533162 AMNQ9BXJ7 453 aa17.31■□□□□ 0.36
PUF60-221ENST00000533162 ABHD16BQ9H3Z7 469 aa17.31■□□□□ 0.36
PUF60-221ENST00000533162 FAM184BQ9ULE4 1060 aa17.31■□□□□ 0.36
PUF60-221ENST00000533162 SH2B2O14492 632 aaPredicted RBP17.3■□□□□ 0.36
PUF60-221ENST00000533162 AKR1A1P14550 325 aa17.3■□□□□ 0.36
PUF60-221ENST00000533162 HSPA4P34932 840 aa17.3■□□□□ 0.36
PUF60-221ENST00000533162 TROAPQ12815 778 aa17.3■□□□□ 0.36
PUF60-221ENST00000533162 MUM1L1Q5H9M0 696 aa17.3■□□□□ 0.36
PUF60-221ENST00000533162 LHX8Q68G74 356 aa17.3■□□□□ 0.36
PUF60-221ENST00000533162 RNF207Q6ZRF8 634 aa17.3■□□□□ 0.36
PUF60-221ENST00000533162 FAM133AQ8N9E0 248 aa17.3■□□□□ 0.36
PUF60-221ENST00000533162 JMJD4Q9H9V9 463 aa17.3■□□□□ 0.36
PUF60-221ENST00000533162 COL11A1P12107 1806 aaPredicted RBP17.3■□□□□ 0.36
PUF60-221ENST00000533162 ZBTB5O15062 677 aa17.29■□□□□ 0.36
PUF60-221ENST00000533162 SMARCA1P28370 1054 aa17.29■□□□□ 0.36
PUF60-221ENST00000533162 CNTN2Q02246 1040 aa17.29■□□□□ 0.36
PUF60-221ENST00000533162 BAATQ14032 418 aaPredicted RBP17.29■□□□□ 0.36
PUF60-221ENST00000533162 QRICH1Q2TAL8 776 aa17.29■□□□□ 0.36
PUF60-221ENST00000533162 PRAMEF19Q5SWL8 479 aa17.29■□□□□ 0.36
PUF60-221ENST00000533162 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
PUF60-221ENST00000533162 C11orf49Q9H6J7 331 aa17.29■□□□□ 0.36
PUF60-221ENST00000533162 SPC25Q9HBM1 224 aa17.29■□□□□ 0.36
PUF60-221ENST00000533162 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.29■□□□□ 0.36
PUF60-221ENST00000533162 ZHX1Q9UKY1 873 aaPredicted RBP17.29■□□□□ 0.36
PUF60-221ENST00000533162 KBTBD13C9JR72 458 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 CALML3P27482 149 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 ACVR2BQ13705 512 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 BLOC1S2Q6QNY1 142 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 ARMCX2Q7L311 632 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 CCDC144CPQ8IYA2 1237 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 SAMD3Q8N6K7 520 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 TRPV1Q8NER1 839 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 DNERQ8NFT8 737 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 KCNB2Q92953 911 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 PAWRQ96IZ0 340 aaKnown RBP17.28■□□□□ 0.36
PUF60-221ENST00000533162 CPVLQ9H3G5 476 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 RIOX1Q9H6W3 641 aa17.28■□□□□ 0.36
PUF60-221ENST00000533162 SEC63Q9UGP8 760 aaKnown RBP17.28■□□□□ 0.36
PUF60-221ENST00000533162 PNMA6FA0A0J9YX94 578 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 DNM1LO00429 736 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 NFIBO00712 420 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 UBE2Q1Q7Z7E8 422 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 RNF180Q86T96 592 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 SGMS1Q86VZ5 419 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 RASEFQ8IZ41 740 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 CLEC4DQ8WXI8 215 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 RRP36Q96EU6 259 aaKnown RBP17.27■□□□□ 0.36
PUF60-221ENST00000533162 JAKMIP1Q96N16 626 aaKnown RBP17.27■□□□□ 0.36
PUF60-221ENST00000533162 SENP2Q9HC62 589 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 RBM28Q9NW13 759 aaKnown RBP17.27■□□□□ 0.36
PUF60-221ENST00000533162 MAP3K20Q9NYL2 800 aaKnown RBP17.27■□□□□ 0.36
PUF60-221ENST00000533162 PCDHA1Q9Y5I3 950 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 NR2E3Q9Y5X4 410 aa17.27■□□□□ 0.36
PUF60-221ENST00000533162 SNAI1O95863 264 aaPredicted RBP17.26■□□□□ 0.35
PUF60-221ENST00000533162 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
PUF60-221ENST00000533162 ZNF865P0CJ78 1059 aaPredicted RBP17.26■□□□□ 0.35
PUF60-221ENST00000533162 RPS6P62753 249 aaKnown RBP17.26■□□□□ 0.35
PUF60-221ENST00000533162 EXOSC10Q01780 885 aaKnown RBP17.26■□□□□ 0.35
PUF60-221ENST00000533162 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
PUF60-221ENST00000533162 FANCBQ8NB91 859 aa17.26■□□□□ 0.35
PUF60-221ENST00000533162 MTMR8Q96EF0 704 aa17.26■□□□□ 0.35
PUF60-221ENST00000533162 SPZ1Q9BXG8 430 aa17.26■□□□□ 0.35
PUF60-221ENST00000533162 LRRC2Q9BYS8 371 aa17.26■□□□□ 0.35
PUF60-221ENST00000533162 XPNPEP3Q9NQH7 507 aa17.26■□□□□ 0.35
PUF60-221ENST00000533162 KIAA0100Q14667 2235 aaKnown RBP17.26■□□□□ 0.35
PUF60-221ENST00000533162 SOWAHBA6NEL2 793 aa17.25■□□□□ 0.35
PUF60-221ENST00000533162 EVI5O60447 810 aa17.25■□□□□ 0.35
PUF60-221ENST00000533162 PPP2R5BQ15173 497 aa17.25■□□□□ 0.35
PUF60-221ENST00000533162 ADCK5Q3MIX3 580 aa17.25■□□□□ 0.35
PUF60-221ENST00000533162 PRPF38BQ5VTL8 546 aaKnown RBP17.25■□□□□ 0.35
PUF60-221ENST00000533162 NOL8Q76FK4 1167 aaKnown RBP17.25■□□□□ 0.35
PUF60-221ENST00000533162 VTA1Q9NP79 307 aa17.25■□□□□ 0.35
PUF60-221ENST00000533162 SNX14Q9Y5W7 946 aa17.25■□□□□ 0.35
PUF60-221ENST00000533162 CCDC196A0A1B0GTZ2 297 aa17.24■□□□□ 0.35
PUF60-221ENST00000533162 ZBTB43O43298 467 aa17.24■□□□□ 0.35
PUF60-221ENST00000533162 DUSP11O75319 330 aaKnown RBP17.24■□□□□ 0.35
PUF60-221ENST00000533162 TAL1P17542 331 aaPredicted RBP17.24■□□□□ 0.35
PUF60-221ENST00000533162 ALDH5A1P51649 535 aaPredicted RBP17.24■□□□□ 0.35
PUF60-221ENST00000533162 RCAN1P53805 252 aa17.24■□□□□ 0.35
PUF60-221ENST00000533162 PDE4DQ08499 809 aa17.24■□□□□ 0.35
PUF60-221ENST00000533162 IQSEC1Q6DN90 963 aa17.24■□□□□ 0.35
PUF60-221ENST00000533162 NSUN6Q8TEA1 469 aaKnown RBP17.24■□□□□ 0.35
PUF60-221ENST00000533162 PIGSQ96S52 555 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms