RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 RUFY4Q6ZNE9 571 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 ANKRD2Q9GZV1 360 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 ZHX3Q9H4I2 956 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 FAM207AQ9NSI2 230 aaPredicted RBP10.43□□□□□ -0.74
BDNF-216ENST00000532997 NID2Q14112 1375 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 PDS5AQ29RF7 1337 aaKnown RBP10.43□□□□□ -0.74
BDNF-216ENST00000532997 ZMYND10O75800 440 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 SRGNP10124 158 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 AARSP49588 968 aaKnown RBP eCLIP10.43□□□□□ -0.74
BDNF-216ENST00000532997 SPAG5Q96R06 1193 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 DNAJC7Q99615 494 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 SUGCTQ9HAC7 445 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 STIM2Q9P246 746 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 HDAC6Q9UBN7 1215 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 LRWD1Q9UFC0 647 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 ZBTB1Q9Y2K1 713 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 UBE2Q2LH0YL09 131 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 CCNT1O60563 726 aaKnown RBP10.43□□□□□ -0.74
BDNF-216ENST00000532997 LIG3P49916 1009 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 INF2Q27J81 1249 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 FAM47AQ5JRC9 791 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 SFMBT2Q5VUG0 894 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 SYNE4Q8N205 404 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 PLCD3Q8N3E9 789 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 PNMA1Q8ND90 353 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 XDHP47989 1333 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 TMCO5BA8MYB1 307 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 SRGAP2O75044 1071 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 CCDC87Q9NVE4 849 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 PCDHA13Q9Y5I0 950 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 TRIM49BA6NDI0 452 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 LRRIQ3A6PVS8 624 aaPredicted RBP10.42□□□□□ -0.74
BDNF-216ENST00000532997 PPP1R12BO60237 982 aaPredicted RBP10.42□□□□□ -0.74
BDNF-216ENST00000532997 KIF11P52732 1056 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 TFAP4Q01664 338 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 CCSER1Q9C0I3 900 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 BCCIPQ9P287 314 aaKnown RBP eCLIP10.42□□□□□ -0.74
BDNF-216ENST00000532997 RIC1Q4ADV7 1423 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 ORC4O43929 436 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 GNA14O95837 355 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 LRRC31Q6UY01 552 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 PIGBQ92521 554 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 SNX12Q9UMY4 172 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 C5P01031 1676 aa10.42□□□□□ -0.74
BDNF-216ENST00000532997 TRAF5O00463 557 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 RHOBTB3O94955 611 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 CYP27A1Q02318 531 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 MTMR3Q13615 1198 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 MMGT1Q8N4V1 131 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 GPATCH11Q8N954 259 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 STK17AQ9UEE5 414 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 FAM169AQ9Y6X4 670 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 A0A1W2PQJ5 194 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 HIBADHP31937 336 aaKnown RBP10.41□□□□□ -0.74
BDNF-216ENST00000532997 ATP6V1AP38606 617 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 ENOX2Q16206 610 aaKnown RBP10.41□□□□□ -0.74
BDNF-216ENST00000532997 NEK8Q86SG6 692 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 CERS3Q8IU89 383 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 SLF2Q8IX21 1173 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 MYCBPQ99417 103 aaPredicted RBP10.41□□□□□ -0.74
BDNF-216ENST00000532997 PSMB7Q99436 277 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 GCOM1H8Y6P7 765 aaPredicted RBP10.41□□□□□ -0.74
BDNF-216ENST00000532997 MYZAPP0CAP1 466 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 FGFR2P21802 821 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 FECHP22830 423 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 EIF4A3P38919 411 aaKnown RBP10.41□□□□□ -0.74
BDNF-216ENST00000532997 GYG1P46976 350 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 NNTQ13423 1086 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 SEC23AQ15436 765 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 MCTP2Q6DN12 878 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 PDXDC2PQ6P474 469 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 CCDC65Q8IXS2 484 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 RNF10Q8N5U6 811 aaKnown RBP10.41□□□□□ -0.74
BDNF-216ENST00000532997 WHAMMQ8TF30 809 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 GPKOWQ92917 476 aaPredicted RBP eCLIP10.41□□□□□ -0.74
BDNF-216ENST00000532997 NAP1L4Q99733 375 aaKnown RBP10.41□□□□□ -0.74
BDNF-216ENST00000532997 EDEM3Q9BZQ6 932 aa10.41□□□□□ -0.74
BDNF-216ENST00000532997 PRPHP41219 470 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 RAPGEF1Q13905 1077 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 ASIC2Q16515 512 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 ZNF662Q6ZS27 426 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 DGKHQ86XP1 1220 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 CCDC50Q8IVM0 306 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 CCDC26Q8TAB7 109 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 CCDC114Q96M63 670 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 VAT1LQ9HCJ6 419 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 RIC8AQ9NPQ8 531 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 SEC31BQ9NQW1 1179 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 CAPN7Q9Y6W3 813 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 CNTNAP5Q8WYK1 1306 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 GOLGA6L10A0A0M3HER8 536 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 MOCS3O95396 460 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 DYNLL1P63167 89 aaKnown RBP10.4□□□□□ -0.74
BDNF-216ENST00000532997 CDK17Q00537 523 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 LRRC63Q05C16 580 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 GIMAP8Q8ND71 665 aaPredicted RBP10.4□□□□□ -0.74
BDNF-216ENST00000532997 NDST4Q9H3R1 872 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 PLEKHA4Q9H4M7 779 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 TRIM10Q9UDY6 481 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 PLCG1P19174 1290 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms