RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 CTDP1Q9Y5B0 961 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-217ENST00000532877 ICAM1P05362 532 aa16.48■□□□□ 0.23
COL16A1-217ENST00000532877 SYT1P21579 422 aa16.48■□□□□ 0.23
COL16A1-217ENST00000532877 USH1GQ495M9 461 aa16.48■□□□□ 0.23
COL16A1-217ENST00000532877 LARP1BQ659C4 914 aaKnown RBP16.48■□□□□ 0.23
COL16A1-217ENST00000532877 MB21D1Q8N884 522 aa16.48■□□□□ 0.23
COL16A1-217ENST00000532877 COA7Q96BR5 231 aa16.48■□□□□ 0.23
COL16A1-217ENST00000532877 R3HDMLQ9H3Y0 253 aa16.48■□□□□ 0.23
COL16A1-217ENST00000532877 RAVER2Q9HCJ3 691 aaKnown RBP16.48■□□□□ 0.23
COL16A1-217ENST00000532877 ZNF214Q9UL59 606 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-217ENST00000532877 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
COL16A1-217ENST00000532877 CEP290O15078 2479 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 XBP1P17861 261 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 FXR1P51114 621 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL16A1-217ENST00000532877 OAZ1P54368 228 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 NAPAP54920 295 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 GUCY1B3Q02153 619 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 TMEM132BQ14DG7 1078 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 OTUD7BQ6GQQ9 843 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 PPP1R18Q6NYC8 613 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 CPXCR1Q8N123 301 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 CCDC148Q8NFR7 591 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 SMCR8Q8TEV9 937 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-217ENST00000532877 GTF3C2Q8WUA4 911 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-217ENST00000532877 AGBL1Q96MI9 1066 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 SH3GLB2Q9NR46 395 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 CCPG1Q9ULG6 757 aa16.47■□□□□ 0.23
COL16A1-217ENST00000532877 ATP2A1O14983 1001 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 PEX10O60683 326 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 CNMDO75829 334 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 TRIM29Q14134 588 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 KRT40Q6A162 431 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 FAM177A1Q8N128 213 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-217ENST00000532877 FBXO18Q8NFZ0 1043 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-217ENST00000532877 PAGR1Q9BTK6 254 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 TEX13BQ9BXU2 312 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 TXNRD2Q9NNW7 524 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 BTBD7Q9P203 1132 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 KCNJ14Q9UNX9 436 aa16.46■□□□□ 0.23
COL16A1-217ENST00000532877 ADGRA2Q96PE1 1338 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 VPS37CA5D8V6 355 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-217ENST00000532877 H3BQV1 296 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 STX6O43752 255 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 TRAF1Q13077 416 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 PKP1Q13835 747 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 PLS1Q14651 629 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-217ENST00000532877 SNRNP48Q6IEG0 339 aaKnown RBP16.45■□□□□ 0.22
COL16A1-217ENST00000532877 RGS22Q8NE09 1264 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 PHF20Q9BVI0 1012 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 RBPJLQ9UBG7 517 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 PNMA2Q9UL42 364 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 RABGAP1Q9Y3P9 1069 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 TRIOBPQ9H2D6 2365 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 ABCB11O95342 1321 aa16.45■□□□□ 0.22
COL16A1-217ENST00000532877 ESYT2A0FGR8 921 aa16.44■□□□□ 0.22
COL16A1-217ENST00000532877 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
COL16A1-217ENST00000532877 MMP1P03956 469 aa16.44■□□□□ 0.22
COL16A1-217ENST00000532877 GCLCP48506 637 aaPredicted RBP16.44■□□□□ 0.22
COL16A1-217ENST00000532877 NLRP5P59047 1200 aa16.44■□□□□ 0.22
COL16A1-217ENST00000532877 NPY5RQ15761 445 aa16.44■□□□□ 0.22
COL16A1-217ENST00000532877 SPATC1LQ9H0A9 340 aa16.44■□□□□ 0.22
COL16A1-217ENST00000532877 ZMYND12Q9H0C1 365 aa16.44■□□□□ 0.22
COL16A1-217ENST00000532877 MTMR6Q9Y217 621 aa16.44■□□□□ 0.22
COL16A1-217ENST00000532877 RANBP2P49792 3224 aaKnown RBP16.43■□□□□ 0.22
COL16A1-217ENST00000532877 OPLAHO14841 1288 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 FKTNO75072 461 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 ALAS1P13196 640 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 CALML3P27482 149 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 STAT3P40763 770 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 ADCY7P51828 1080 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 ERVK-9P63128 1117 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 ERVK-24P63145 666 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 RIOX2Q8IUF8 465 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 HOMER2Q9NSB8 354 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 CIZ1Q9ULV3 898 aaPredicted RBP16.43■□□□□ 0.22
COL16A1-217ENST00000532877 MRPL11Q9Y3B7 192 aaKnown RBP16.43■□□□□ 0.22
COL16A1-217ENST00000532877 RIPK3Q9Y572 518 aa16.43■□□□□ 0.22
COL16A1-217ENST00000532877 SMCO2A6NFE2 343 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 ALDH1A1P00352 501 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 PDIA4P13667 645 aaKnown RBP16.42■□□□□ 0.22
COL16A1-217ENST00000532877 TKFCQ3LXA3 575 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 DIS3L2Q8IYB7 885 aaKnown RBP16.42■□□□□ 0.22
COL16A1-217ENST00000532877 ANKRD13CQ8N6S4 541 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 DAGLBQ8NCG7 672 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 CLEC4DQ8WXI8 215 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 MOV10L1Q9BXT6 1211 aaKnown RBP16.42■□□□□ 0.22
COL16A1-217ENST00000532877 C6orf50Q9HD87 102 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 RIC8AQ9NPQ8 531 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 RNF146Q9NTX7 359 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 MORF4L1Q9UBU8 362 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 PCDHA4Q9UN74 947 aa16.42■□□□□ 0.22
COL16A1-217ENST00000532877 NFIBO00712 420 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 ADAMTS3O15072 1205 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 BRD1O95696 1058 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 GNA11P29992 359 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 KRT2P35908 639 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms