RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 COL13A1Q5TAT6 717 aaPredicted RBP13.81□□□□□ -0.2
TRAF3IP2-212ENST00000532708 CHST13Q8NET6 341 aa13.81□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PHKBQ93100 1093 aa13.81□□□□□ -0.2
TRAF3IP2-212ENST00000532708 MMP19Q99542 508 aa13.81□□□□□ -0.2
TRAF3IP2-212ENST00000532708 NUDT12Q9BQG2 462 aa13.81□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PLXNB2O15031 1838 aa13.81□□□□□ -0.2
TRAF3IP2-212ENST00000532708 NFIBO00712 420 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 STRNO43815 780 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PFKFB2O60825 505 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 CD2BP2O95400 341 aaKnown RBP13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 GNRH1P01148 92 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PGK2P07205 417 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 CYP2B6P20813 491 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 ADORA2AP29274 412 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 COPB2P35606 906 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 MORN1Q5T089 497 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 CLEC4DQ8WXI8 215 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 AMNQ9BXJ7 453 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 ACAD9Q9H845 621 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 SEC63Q9UGP8 760 aaKnown RBP13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 LIMCH1Q9UPQ0 1083 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PCDHA1Q9Y5I3 950 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 SLC15A5A6NIM6 579 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 CPLX1O14810 134 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 ST18O60284 1047 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 GRB14Q14449 540 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 KCTD2Q14681 263 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 TKFCQ3LXA3 575 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 ANKRD35Q8N283 1001 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PTPN22Q9Y2R2 807 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PTCH2Q9Y6C5 1203 aa13.8□□□□□ -0.2
TRAF3IP2-212ENST00000532708 COBLO75128 1261 aa13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 NSMFQ6X4W1 530 aa13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 RAET1EQ8TD07 263 aa13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 TBC1D5Q92609 795 aa13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 USP6NLQ92738 828 aa13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 DDX11Q96FC9 970 aa13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 SLC26A6Q9BXS9 759 aa13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 A1CFQ9NQ94 594 aaKnown RBP13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 FBXO40Q9UH90 709 aa13.79□□□□□ -0.2
TRAF3IP2-212ENST00000532708 ABCB11O95342 1321 aa13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 IFNAR1P17181 557 aa13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 SOCS4Q8WXH5 440 aa13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PNMA2Q9UL42 364 aa13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 DEKP35659 375 aaKnown RBP13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 HEATR3Q7Z4Q2 680 aa13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 ABRAQ8N0Z2 381 aa13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 GTF3C6Q969F1 213 aa13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PURBQ96QR8 312 aaKnown RBP13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 MRPL11Q9Y3B7 192 aaKnown RBP13.78□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PTPDC1A2A3K4 754 aa13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 OPLAHO14841 1288 aa13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 PRPF3O43395 683 aaKnown RBP13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 CTDNEP1O95476 244 aa13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 ELNP15502 786 aa13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 RGS2P41220 211 aa13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 PRMT2P55345 433 aa13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 ST3GAL1Q11201 340 aa13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 BAATQ14032 418 aaPredicted RBP13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 CCL14Q16627 93 aa13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 MCOLN1Q9GZU1 580 aa13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 CYP39A1Q9NYL5 469 aa13.77□□□□□ -0.21
TRAF3IP2-212ENST00000532708 CALML3P27482 149 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 AKAP17AQ02040 695 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 CNTN2Q02246 1040 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 SSRP1Q08945 709 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 PKN1Q16512 942 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 PKN2Q16513 984 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 WWC2Q6AWC2 1192 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 FBXO46Q6PJ61 603 aaPredicted RBP13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 CPLX2Q6PUV4 134 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 SLC30A10Q6XR72 485 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 RNF207Q6ZRF8 634 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 CCDC83Q8IWF9 413 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 ZSCAN31Q96LW9 406 aaPredicted RBP13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 DNAJC25-GNG10A0A024R161 153 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 ADCY3O60266 1144 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 CFBP00751 764 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 RPS6P62753 249 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 IRF5Q13568 498 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 PFKFB3Q16875 520 aaPredicted RBP13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 SH3TC2Q8TF17 1288 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 APBA2Q99767 749 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 RNF26Q9BY78 433 aaPredicted RBP13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 FLRT1Q9NZU1 646 aa13.76□□□□□ -0.21
TRAF3IP2-212ENST00000532708 BRCA2P51587 3418 aa13.75□□□□□ -0.21
TRAF3IP2-212ENST00000532708 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
TRAF3IP2-212ENST00000532708 SCG2P13521 617 aa13.75□□□□□ -0.21
TRAF3IP2-212ENST00000532708 TRAF1Q13077 416 aa13.75□□□□□ -0.21
TRAF3IP2-212ENST00000532708 ZNF792Q3KQV3 632 aa13.75□□□□□ -0.21
TRAF3IP2-212ENST00000532708 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
TRAF3IP2-212ENST00000532708 TRIM22Q8IYM9 498 aa13.75□□□□□ -0.21
TRAF3IP2-212ENST00000532708 TRIB2Q92519 343 aa13.75□□□□□ -0.21
TRAF3IP2-212ENST00000532708 PLXNA1Q9UIW2 1896 aa13.75□□□□□ -0.21
TRAF3IP2-212ENST00000532708 PFASO15067 1338 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms