RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 HMX1Q9NP08 348 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 SOWAHBA6NEL2 793 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 SGPL1O95470 568 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 CYBAP13498 195 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 CNTN2Q02246 1040 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 LHX8Q68G74 356 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 UBE2Q1Q7Z7E8 422 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 ANKRD35Q8N283 1001 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 IL17RAQ96F46 866 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 DDX11Q96FC9 970 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 TINF2Q9BSI4 451 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 ZSWIM6Q9HCJ5 1215 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 CYP39A1Q9NYL5 469 aa16.24■□□□□ 0.19
TSPAN4-220ENST00000532375 SNAI1O95863 264 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 RXRAP19793 462 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 RPS6KB1P23443 525 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 SMARCA1P28370 1054 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 C8orf34Q49A92 452 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 PRAMEF19Q5SWL8 479 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 MFSD14CQ5VZR4 134 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 APOA5Q6Q788 366 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 SRBD1Q8N5C6 995 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 U2AF1L4Q8WU68 220 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 NUP133Q8WUM0 1156 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 TBC1D5Q92609 795 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 DEFB118Q96PH6 123 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 PURBQ96QR8 312 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 TM6SF1Q9BZW5 370 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 FAM217BQ9NTX9 383 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 PNMA2Q9UL42 364 aa16.23■□□□□ 0.19
TSPAN4-220ENST00000532375 CCDC69A6NI79 296 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 OPLAHO14841 1288 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 PLEKHA8P1O95397 391 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 MNX1P50219 401 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 BAATQ14032 418 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 BLOC1S2Q6QNY1 142 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 RAB11FIP4Q86YS3 637 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 MSL3Q8N5Y2 521 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 FANCBQ8NB91 859 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 RGS22Q8NE09 1264 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 PIGSQ96S52 555 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 KATNBL1Q9H079 304 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 SLC12A7Q9Y666 1083 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 FRMPD3Q5JV73 1810 aa16.22■□□□□ 0.19
TSPAN4-220ENST00000532375 ZBTB5O15062 677 aa16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 ZNF865P0CJ78 1059 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 EVCP57679 992 aa16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 FUT2Q10981 343 aa16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 USH1GQ495M9 461 aa16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 NFXL1Q6ZNB6 911 aa16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 Q6ZUG5 572 aa16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 RUFY3Q7L099 469 aa16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 FBXO11Q86XK2 927 aa16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 SPZ1Q9BXG8 430 aa16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 OGDHLQ9ULD0 1010 aa16.21■□□□□ 0.19
TSPAN4-220ENST00000532375 PFASO15067 1338 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 TNRC18O15417 2968 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 CALM1P0DP23 149 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 CALM2P0DP24 149 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 CALM3P0DP25 149 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 PSMA5P28066 241 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 GHRHRQ02643 423 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 NSMFQ6X4W1 530 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 CCDC144CPQ8IYA2 1237 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 CMTR1Q8N1G2 835 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 CTCFLQ8NI51 663 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 NRBP1Q9UHY1 535 aa16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 DDX49Q9Y6V7 483 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-220ENST00000532375 ABCB11O95342 1321 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 PNMA6FA0A0J9YX94 578 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 DHX16O60231 1041 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 KIF5BP33176 963 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 RPS6P62753 249 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 APOBRQ0VD83 1088 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 TOB2Q14106 344 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 SLC30A10Q6XR72 485 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 TMTC3Q6ZXV5 915 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 MICU3Q86XE3 530 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 MORC4Q8TE76 937 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 LZTS2Q9BRK4 669 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 MAF1Q9H063 256 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 COL20A1Q9P218 1284 aa16.19■□□□□ 0.18
TSPAN4-220ENST00000532375 KLF18A0A0U1RQI7 1052 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 SEPT4O43236 478 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 ZBTB43O43298 467 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 CAPN2P17655 700 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 CDC27P30260 824 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 GNAQP50148 359 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 RCAN1P53805 252 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 ANAPC15P60006 121 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 RNF207Q6ZRF8 634 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 HOMER1Q86YM7 354 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 BRF1Q92994 677 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms