RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CDK8P49336 464 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 BACE1P56817 501 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 DAB2P98082 770 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 PLCB3Q01970 1234 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 SP3Q02447 781 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 PABPC4Q13310 644 aaKnown RBP eCLIP6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 SEPT2Q15019 361 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 GPAT2Q6NUI2 795 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 BLOC1S3Q6QNY0 202 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 CWC27Q6UX04 472 aaKnown RBP6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 RNF19BQ6ZMZ0 732 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 TMEM179Q6ZVK1 233 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 STK11IPQ8N1F8 1099 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 HELQQ8TDG4 1101 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 COL26A1Q96A83 441 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 ERO1AQ96HE7 468 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 CCDC17Q96LX7 622 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 DMRTB1Q96MA1 342 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 PRKD2Q9BZL6 878 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 MKNK2Q9HBH9 465 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 ZNF287Q9HBT7 754 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 EPB41L4AQ9HCS5 686 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 KLHL42Q9P2K6 505 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 AGTPBP1Q9UPW5 1226 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 SLC45A1Q9Y2W3 748 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 PCNTO95613 3336 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 CCDC171Q6TFL3 1326 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 AKR1B1P15121 316 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 GSPT1P15170 499 aaKnown RBP6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 JUNDP17535 347 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 CTHP32929 405 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 GUCY1A2P33402 732 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 PBX2P40425 430 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 PTK2Q05397 1052 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 PPARAQ07869 468 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 DGKZQ13574 1117 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 TCEAL1Q15170 157 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 ZYXQ15942 572 aaKnown RBP6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 TREML2Q5T2D2 321 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 VPS53Q5VIR6 699 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 POTEEQ6S8J3 1075 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 CTU1Q7Z7A3 348 aaKnown RBP6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 SMCR8Q8TEV9 937 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 MRFAP1L1Q96HT8 127 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 LRCH3Q96II8 777 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 DUSP9Q99956 384 aaKnown RBP6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 HINFPQ9BQA5 517 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 SEPT3Q9UH03 358 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 CPA4Q9UI42 421 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 FOCADQ5VW36 1801 aa6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 DDX60LQ5H9U9 1706 aaKnown RBP6.84□□□□□ -1.31
HMGB1P42-201ENST00000532126 DOCK1Q14185 1865 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 ROBO3Q96MS0 1386 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 SIPA1L1O43166 1804 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 FOXP2O15409 715 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 PRDM1O75626 825 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 HSPD1P10809 573 aaKnown RBP6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 NPR3P17342 541 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 MAPK8P45983 427 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 USP14P54578 494 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 IRX3P78415 501 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 ICA1Q05084 483 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 PDE4BQ07343 736 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 KIF22Q14807 665 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 ARHGEF6Q15052 776 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 ALX1Q15699 326 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 PKN2Q16513 984 aaKnown RBP6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 PTPRNQ16849 979 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 VARS2Q5ST30 1063 aaKnown RBP6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 PPP1R18Q6NYC8 613 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 BRICD5Q6PL45 260 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 TRAF7Q6Q0C0 670 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 C17orf99Q6UX52 265 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 ZNF589Q86UQ0 364 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 ZNF654Q8IZM8 581 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 ZNF444Q8N0Y2 327 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 CD99L2Q8TCZ2 262 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 ACER1Q8TDN7 264 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 C12orf42Q96LP6 360 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 MCOLN1Q9GZU1 580 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 KIAA1683Q9H0B3 1180 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 SH2D4AQ9H788 454 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 KANSL2Q9H9L4 492 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 ARHGEF10LQ9HCE6 1279 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 PCDHB9Q9Y5E1 797 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 NAV1Q8NEY1 1877 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 CDK5RAP2Q96SN8 1893 aa6.83□□□□□ -1.32
HMGB1P42-201ENST00000532126 ADGRA2Q96PE1 1338 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 A0A1W2PRG0 241 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 DKK1O94907 266 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 FGAP02671 866 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 EEF2P13639 858 aaKnown RBP6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 VCAM1P19320 739 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 HOXA7P31268 230 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 LACTBP83111 547 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 CLEC10AQ8IUN9 316 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 CCAR1Q8IX12 1150 aaKnown RBP6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 ANKRD13CQ8N6S4 541 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms